RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 NEU2Q9Y3R4 380 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 FRMPD4Q14CM0 1322 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 RCCD1A6NED2 376 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 LRRC53A6NM62 1247 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CHURC1-FNTBB4DL54 471 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 B4E1Z4 1266 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 LINC01387J3KSC0 135 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CCNDBP1O95273 360 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CFBP00751 764 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 NR4A1P22736 598 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 PMLP29590 882 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SERPINB5P36952 375 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 HOXA1P49639 335 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CACNB3P54284 484 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 AQP4P55087 323 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SPARCL1Q14515 664 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ZNF846Q147U1 533 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 OASLQ15646 514 aaKnown RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 LRRC36Q1X8D7 754 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 STYK1Q6J9G0 422 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 WDR59Q6PJI9 974 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CYP20A1Q6UW02 462 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SPATC1Q76KD6 591 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 TMPRSS9Q7Z410 1059 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SETD3Q86TU7 594 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 IGFN1Q86VF2 1251 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 TXNDC2Q86VQ3 553 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ZNF354CQ86Y25 554 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 DNAAF5Q86Y56 855 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 KSR1Q8IVT5 923 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SRRM1Q8IYB3 904 aaKnown RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 BEND7Q8N7W2 519 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 Q8N9G6 341 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 VANGL1Q8TAA9 524 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 LRRC20Q8TCA0 184 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 HM13Q8TCT9 377 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ESR2Q92731 530 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 LPPQ93052 612 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ISOC1Q96CN7 298 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 NSL1Q96IY1 281 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ZNF347Q96SE7 839 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 PITPNM3Q9BZ71 974 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 EPB41L4BQ9H329 900 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 LRRC19Q9H756 370 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 DAGLAQ9Y4D2 1042 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 RBM8AQ9Y5S9 174 aaKnown RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ACTL7BQ9Y614 415 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 KDM3BQ7LBC6 1761 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 PEAK1Q9H792 1746 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CLUHO75153 1309 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 MEI4A8MW99 385 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 PSMD12O00232 456 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 RTCAO00442 366 aaKnown RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CBX6O95503 412 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 APOC1P02654 83 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CDH1P12830 882 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ITGB6P18564 788 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 F8A1P23610 371 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 L1CAMP32004 1257 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 STAT1P42224 750 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 STARP49675 285 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ARHGDIAP52565 204 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CABP4P57796 275 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CSNK2BP67870 215 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 NAB1Q13506 487 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ERV3-1Q14264 604 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SLC39A14Q15043 492 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SPA17Q15506 151 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ZBED5Q49AG3 693 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CYP27C1Q4G0S4 372 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 FAM76BQ5HYJ3 339 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 OGFRL1Q5TC84 451 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 C1orf146Q5VVC0 180 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ITPRIPL1Q6GPH6 555 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CLNKQ7Z7G1 428 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 CCDC33Q8N5R6 958 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 OR5H6Q8NGV6 325 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 POMGNT1Q8WZA1 660 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SMG7Q92540 1137 aaKnown RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 KRT35Q92764 455 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 GLG1Q92896 1179 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 APOPT1Q96IL0 206 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 WDR12Q9GZL7 423 aaKnown RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 MAGEE1Q9HCI5 957 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 PRDM8Q9NQV8 689 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 ACTR3BQ9P1U1 418 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 PNMA8BQ9ULN7 279 aaPredicted RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 SMG5Q9UPR3 1016 aaKnown RBP9.12□□□□□ -0.95
COMMD3-215ENST00000602574 PRELID3BQ9Y3B1 194 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 AP4S1Q9Y587 144 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 GMPPBQ9Y5P6 360 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 MST1RQ04912 1400 aa9.12□□□□□ -0.95
COMMD3-215ENST00000602574 EFCAB10A6NFE3 127 aa9.11□□□□□ -0.95
COMMD3-215ENST00000602574 NUTM2BA6NNL0 878 aaPredicted RBP9.11□□□□□ -0.95
COMMD3-215ENST00000602574 NUTM2EB1AL46 878 aaPredicted RBP9.11□□□□□ -0.95
COMMD3-215ENST00000602574 STMND1H3BQB6 276 aa9.11□□□□□ -0.95
COMMD3-215ENST00000602574 PLK4O00444 970 aa9.11□□□□□ -0.95
COMMD3-215ENST00000602574 SLC22A2O15244 555 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms