RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 CALN1Q9BXU9 219 aa18.15■□□□□ 0.5
DDX49-213ENST00000602113 TKTL2Q9H0I9 626 aa18.15■□□□□ 0.5
DDX49-213ENST00000602113 TLE6Q9H808 572 aa18.15■□□□□ 0.5
DDX49-213ENST00000602113 MARCH2Q9P0N8 246 aa18.15■□□□□ 0.5
DDX49-213ENST00000602113 HCFC2Q9Y5Z7 792 aa18.15■□□□□ 0.5
DDX49-213ENST00000602113 TRANK1O15050 2925 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 NRG2O14511 850 aaPredicted RBP18.14■□□□□ 0.49
DDX49-213ENST00000602113 CETN2P41208 172 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 PPP3CCP48454 512 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 NRIP1P48552 1158 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 CLUL1Q15846 466 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 DUSP6Q16828 381 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 HECTD3Q5T447 861 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 KAZNQ674X7 775 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 GAREM2Q75VX8 874 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 MIB1Q86YT6 1006 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 MYRIPQ8NFW9 859 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 HDAC7Q8WUI4 952 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 TSC1Q92574 1164 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 RNF34Q969K3 372 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 SLC39A13Q96H72 371 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 FCRL2Q96LA5 508 aaPredicted RBP18.14■□□□□ 0.49
DDX49-213ENST00000602113 ARHGEF38Q9NXL2 777 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 RASAL2Q9UJF2 1139 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 TLR6Q9Y2C9 796 aa18.14■□□□□ 0.49
DDX49-213ENST00000602113 C2orf78A6NCI8 922 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 COCHO43405 550 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 HOXA9P31269 272 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 AIF1P55008 147 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 PPP2R5DQ14738 602 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 TRIP4Q15650 581 aaPredicted RBP18.13■□□□□ 0.49
DDX49-213ENST00000602113 PPP6R3Q5H9R7 873 aaPredicted RBP18.13■□□□□ 0.49
DDX49-213ENST00000602113 EFHC2Q5JST6 749 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 BRMS1LQ5PSV4 323 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 ELMOD1Q8N336 334 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 PRELID2Q8N945 189 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 MRPL38Q96DV4 380 aaKnown RBP18.13■□□□□ 0.49
DDX49-213ENST00000602113 RPGRIP1Q96KN7 1286 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 CDK5RAP1Q96SZ6 601 aaKnown RBP18.13■□□□□ 0.49
DDX49-213ENST00000602113 CORO1BQ9BR76 489 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 HCFC1R1Q9NWW0 138 aa18.13■□□□□ 0.49
DDX49-213ENST00000602113 MTCL1Q9Y4B5 1905 aaKnown RBP18.13■□□□□ 0.49
DDX49-213ENST00000602113 KCNU1A8MYU2 1149 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 OAS1P00973 400 aaKnown RBP18.12■□□□□ 0.49
DDX49-213ENST00000602113 GABRR2P28476 465 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 CCR1P32246 355 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 ATP5C1P36542 298 aaKnown RBP18.12■□□□□ 0.49
DDX49-213ENST00000602113 TUBP50607 506 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 TBX4P57082 545 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 NNTQ13423 1086 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 ARL13BQ3SXY8 428 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 KLHDC10Q6PID8 442 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 MAP7D3Q8IWC1 876 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 VN1R2Q8NFZ6 395 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 RNF38Q9H0F5 515 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 DNMT3LQ9UJW3 386 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 EFR3BQ9Y2G0 817 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 R3HDM2Q9Y2K5 976 aaKnown RBP18.12■□□□□ 0.49
DDX49-213ENST00000602113 SNX10Q9Y5X0 201 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 SLC12A8A0AV02 714 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 FAM72CH0Y354 149 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 IGLV3-27P01718 113 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 HNRNPA1P09651 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX49-213ENST00000602113 GTF2F1P35269 517 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX49-213ENST00000602113 SEMA3BQ13214 749 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 PABPC1LQ4VXU2 614 aaKnown RBP18.12■□□□□ 0.49
DDX49-213ENST00000602113 ANKRD20A8PQ5CZ79 823 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 ZNF697Q5TEC3 545 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 FAM72AQ5TYM5 149 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 FAM72DQ6L9T8 149 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 TADA2BQ86TJ2 420 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 FAM72BQ86X60 149 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 VSIG1Q86XK7 387 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 MMGT1Q8N4V1 131 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 FAF2Q96CS3 445 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 RNF157Q96PX1 679 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 ZNF670Q9BS34 389 aa18.12■□□□□ 0.49
DDX49-213ENST00000602113 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX49-213ENST00000602113 CWC15Q9P013 229 aaKnown RBP18.12■□□□□ 0.49
DDX49-213ENST00000602113 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX49-213ENST00000602113 XPO7Q9UIA9 1087 aaKnown RBP18.12■□□□□ 0.49
DDX49-213ENST00000602113 V9GYY5 206 aaPredicted RBP18.12■□□□□ 0.49
DDX49-213ENST00000602113 EFCAB8A8MWE9 144 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 ZNF487B1APH4 448 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 PAGE1O75459 146 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 TJP3O95049 919 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 HMBSP08397 361 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 MYL4P12829 197 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 CYP4F8P98187 520 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 KCNC3Q14003 757 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 NAA30Q147X3 362 aaPredicted RBP18.11■□□□□ 0.49
DDX49-213ENST00000602113 BBS12Q6ZW61 710 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 RFX6Q8HWS3 928 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 PQLC3Q8N755 202 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 PCDH19Q8TAB3 1148 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 ZNF707Q96C28 371 aaPredicted RBP18.11■□□□□ 0.49
DDX49-213ENST00000602113 CSPG4P5Q96PW8 444 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 SLC22A12Q96S37 553 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 ZNF576Q9H609 170 aa18.11■□□□□ 0.49
DDX49-213ENST00000602113 ASAH2Q9NR71 780 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms