RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TGM2P21980 687 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 PGFP49763 221 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 PTK6Q13882 451 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 OASLQ15646 514 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 EMBQ6PCB8 327 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 DDX42Q86XP3 938 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 GSPT2Q8IYD1 628 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 PQLC3Q8N755 202 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 STKLD1Q8NE28 680 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 TRIM31Q9BZY9 425 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 DPH5Q9H2P9 285 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 TLR8Q9NR97 1041 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 CWC15Q9P013 229 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 H3BRJ5 948 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 TLL1O43897 1013 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 LILRB3O75022 631 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 HLTFQ14527 1009 aaKnown RBP eCLIP18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 MSANTD2Q6P1R3 559 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 PYROXD2Q8N2H3 581 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 PLD5Q8N7P1 536 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 GIPC2Q8TF65 315 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 P3H4Q92791 437 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 CSPG4P5Q96PW8 444 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 TTLL2Q9BWV7 592 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 MAGEB5Q9BZ81 275 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 RXFP1Q9HBX9 757 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 SAE1Q9UBE0 346 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 ZMYND8Q9ULU4 1186 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 IRAK2O43187 625 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 SEC24AO95486 1093 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 CTSAP10619 480 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 ATF6P18850 670 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 ZNF135P52742 658 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 TAF10Q12962 218 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 GSTA5Q7RTV2 222 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 RNF34Q969K3 372 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 ZBP1Q9H171 429 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 SNX24Q9Y343 169 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 NEU2Q9Y3R4 380 aa18.31■□□□□ 0.52
SHKBP1-224ENST00000600718 EIF3EP60228 445 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 NNTQ13423 1086 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 MTMR3Q13615 1198 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 NOMO1Q15155 1222 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 HDXQ7Z353 690 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 ALLCQ8N6M5 410 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 KLHL23Q8NBE8 558 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 CCHCR1Q8TD31 782 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 CASP10Q92851 521 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 CAVIN3Q969G5 261 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 SERPINB11Q96P15 392 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 TKTL2Q9H0I9 626 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 CYP4F11Q9HBI6 524 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 TMPRSS4Q9NRS4 437 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 OLA1Q9NTK5 396 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 MCF2LO15068 1137 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 PECAM1P16284 738 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 GOT1P17174 413 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 DNAJB2P25686 324 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 ELF1P32519 619 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 RPL21P46778 160 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 ALDH1A3P47895 512 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 HCAR3P49019 387 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 CCDC89Q8N998 374 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 AUTS2Q8WXX7 1259 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 FAM129AQ9BZQ8 928 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 UBE2OQ9C0C9 1292 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 ARHGEF38Q9NXL2 777 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 ASIC3Q9UHC3 531 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 SFMBT1Q9UHJ3 866 aa18.3■□□□□ 0.52
SHKBP1-224ENST00000600718 KRT14P02533 472 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 ZDHHC11BP0C7U3 371 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 CSH1P0DML2 217 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 CSH2P0DML3 217 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 RARGP13631 454 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 ECHS1P30084 290 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 CCR1P32246 355 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 BMPR1AP36894 532 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 NR2C2P49116 596 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 RASIP1Q5U651 963 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 C1orf228Q6PIY5 440 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 NPNTQ6UXI9 565 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 OVCA2Q8WZ82 227 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 FUT8Q9BYC5 575 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 OSBPL2Q9H1P3 480 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 ANLNQ9NQW6 1124 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 PLXNA3P51805 1871 aa18.29■□□□□ 0.52
SHKBP1-224ENST00000600718 EEF2KO00418 725 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 AMPD1P23109 780 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 TNNT3P45378 269 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 SEMA3BQ13214 749 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 PPP2R5DQ14738 602 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 KCTD19Q17RG1 926 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 TCEAL8Q8IYN2 117 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 PDZD8Q8NEN9 1154 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 DPF3Q92784 378 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 HAPLN3Q96S86 360 aa18.28■□□□□ 0.52
SHKBP1-224ENST00000600718 GRHL1Q9NZI5 618 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms