RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 NANOGQ9H9S0 305 aa10.15□□□□□ -0.79
NFKB1-212ENST00000600343 SCPEP1Q9HB40 452 aa10.15□□□□□ -0.79
NFKB1-212ENST00000600343 TAS2R14Q9NYV8 317 aa10.15□□□□□ -0.79
NFKB1-212ENST00000600343 MOCS1Q9NZB8 636 aa10.15□□□□□ -0.79
NFKB1-212ENST00000600343 ITGA11Q9UKX5 1188 aa10.15□□□□□ -0.79
NFKB1-212ENST00000600343 CAB39Q9Y376 341 aaPredicted RBP10.15□□□□□ -0.79
NFKB1-212ENST00000600343 FAM205AQ6ZU69 1335 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 SH3BP5O60239 455 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 MX2P20592 715 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 MLLT3P42568 568 aaPredicted RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 MARSP56192 900 aaKnown RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 TMPRSS15P98073 1019 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 FLOT2Q14254 428 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 ALX1Q15699 326 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 IFIT1BQ5T764 474 aaKnown RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 TTC33Q6PID6 262 aaPredicted RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 FOXR2Q6PJQ5 311 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 CYP20A1Q6UW02 462 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 ANKS1BQ7Z6G8 1248 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 HERVK_113Q902F9 699 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 MKRN2Q9H000 416 aaKnown RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 POLR1BQ9H9Y6 1135 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 LAMB4A4D0S4 1761 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 ALKQ9UM73 1620 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 TK2O00142 265 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 GFAPP14136 432 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 CALML3P27482 149 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 JAM2P57087 298 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 FASTKD3Q14CZ7 662 aaKnown RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 C6orf10Q5SRN2 563 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 SLC22A16Q86VW1 577 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 HERC6Q8IVU3 1022 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 APPL2Q8NEU8 664 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 DACT3Q96B18 629 aaPredicted RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 SH3YL1Q96HL8 342 aaPredicted RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 STRBPQ96SI9 672 aaKnown RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 MXD3Q9BW11 206 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 TARS2Q9BW92 718 aaKnown RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 RSPH9Q9H1X1 276 aaPredicted RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 TMEM9Q9P0T7 183 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 MAU2Q9Y6X3 613 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 ZHX2Q9Y6X8 837 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 KDM3BQ7LBC6 1761 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 SMCO2A6NFE2 343 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 EVPLLA8MZ36 301 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 LAD1O00515 517 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 VWA5AO00534 786 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 ACAT1P24752 427 aaKnown RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 RAD23AP54725 363 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 MLLT10P55197 1068 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 PPP2R5DQ14738 602 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 SNX17Q15036 470 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 MAPK11Q15759 364 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 ANO4Q32M45 955 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 IGSF11Q5DX21 431 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 DCAF17Q5H9S7 520 aaPredicted RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 NDUFAF5Q5TEU4 345 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 DPY19L2P1Q6NXN4 242 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 KCTD20Q7Z5Y7 419 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 CRLF3Q8IUI8 442 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 EBF4Q9BQW3 602 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 ACAT2Q9BWD1 397 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 POLE4Q9NR33 117 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 CNOT11Q9UKZ1 510 aaKnown RBP10.14□□□□□ -0.79
NFKB1-212ENST00000600343 PSME4Q14997 1843 aa10.14□□□□□ -0.79
NFKB1-212ENST00000600343 RNMTO43148 476 aaKnown RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 KCNH1O95259 989 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 DBTP11182 482 aaKnown RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 PTPN1P18031 435 aaKnown RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 GRM5P41594 1212 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 GRIA3P42263 894 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 PEX6Q13608 980 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 FAM182AQ5T1J6 154 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 AGMOQ6ZNB7 445 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 ADAMTSL2Q86TH1 951 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 SAMD14Q8IZD0 417 aaPredicted RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 FOXP3Q9BZS1 431 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 ATP13A2Q9NQ11 1180 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 CROCCQ5TZA2 2017 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 LOC100653049A0A140TA62 436 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 NOP56O00567 594 aaKnown RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 HDAC3O15379 428 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 PRKAB2O43741 272 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 GCATO75600 419 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 KRT34O76011 436 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 MT-ND3P03897 115 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 DHRS4L1P0CG22 281 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 ZNF26P17031 533 aaPredicted RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 TECP42680 631 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 PTPN9P43378 593 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 POU6F2P78424 691 aaPredicted RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 POU6F1Q14863 301 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 SLC4A11Q8NBS3 891 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 EPS8L1Q8TE68 723 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 LARP4BQ92615 738 aaKnown RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 DEPDC7Q96QD5 511 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 CLSTN3Q9BQT9 956 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 SYTL2Q9HCH5 934 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms