RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 MON1BQ7L1V2 547 aa20.33■□□□□ 0.85
SHKBP1-221ENST00000599833 DENND1CQ8IV53 801 aa20.33■□□□□ 0.85
SHKBP1-221ENST00000599833 SFTPA1Q8IWL2 248 aa20.33■□□□□ 0.85
SHKBP1-221ENST00000599833 MAML2Q8IZL2 1156 aaPredicted RBP20.33■□□□□ 0.85
SHKBP1-221ENST00000599833 DCLK3Q9C098 648 aa20.33■□□□□ 0.85
SHKBP1-221ENST00000599833 PDCL3Q9H2J4 239 aa20.33■□□□□ 0.85
SHKBP1-221ENST00000599833 HAUS4Q9H6D7 363 aa20.33■□□□□ 0.85
SHKBP1-221ENST00000599833 LSM7Q9UK45 103 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-221ENST00000599833 WDR87Q6ZQQ6 2873 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 TRUB2O95900 331 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 EGFP01133 1207 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 PENKP01210 267 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 ADH5P11766 374 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 EIF2DP41214 584 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 ARID5BQ14865 1188 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 ASIC2Q16515 512 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 FAM133BQ5BKY9 247 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 FYB2Q5VWT5 728 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 RNF43Q68DV7 783 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 NADSYN1Q6IA69 706 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 TOGARAM2Q6ZUX3 1019 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 VSTM4Q8IW00 320 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 CPXM2Q8N436 756 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 DTWD2Q8NBA8 298 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 GOLGA1Q92805 767 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 MYEOVQ96EZ4 313 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 NPY6RQ99463 290 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 CHRDQ9H2X0 955 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 LMAN1LQ9HAT1 526 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 FBXO10Q9UK96 956 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 TLR6Q9Y2C9 796 aa20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 MRPS17Q9Y2R5 130 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-221ENST00000599833 I6L893 689 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 STK25O00506 426 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 DDX3XO00571 662 aaKnown RBP eCLIP20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 TRIM24O15164 1050 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 LATS1O95835 1130 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 FLT3P36888 993 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 TBX4P57082 545 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 ZBED6P86452 979 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 TCF15Q12870 199 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 DCAF6Q58WW2 860 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 ARTNQ5T4W7 220 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 SFMBT2Q5VUG0 894 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 PKN3Q6P5Z2 889 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 Q6ZS52 159 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 ARCQ7LC44 396 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 SYN2Q92777 582 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 CD101Q93033 1021 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 SERPINB11Q96P15 392 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 P2RY13Q9BPV8 354 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 C11orf70Q9BRQ4 267 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 TRIM62Q9BVG3 475 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 ANLNQ9NQW6 1124 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 C2orf42Q9NWW7 574 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 XPO7Q9UIA9 1087 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 ZNF510Q9Y2H8 683 aa20.31■□□□□ 0.84
SHKBP1-221ENST00000599833 MYO18AQ92614 2054 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 A0A0A0MRY4 1105 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 GALR2O43603 387 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 CACNG3O60359 315 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 ADH1CP00326 375 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 SKILP12757 684 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 SLC6A4P31645 630 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 HNRNPH3P31942 346 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 NOS2P35228 1153 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 MATKP42679 507 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 SGSHP51688 502 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 NUBP1P53384 320 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 GAD2Q05329 585 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 NR1H3Q13133 447 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 DNAAF5Q86Y56 855 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 AZIN2Q96A70 460 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 IQCDQ96DY2 449 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 SYNCQ9H7C4 482 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 HCN2Q9UL51 889 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 FANCMQ8IYD8 2048 aa20.3■□□□□ 0.84
SHKBP1-221ENST00000599833 KCNU1A8MYU2 1149 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 K7EQS6 105 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 CAPN9O14815 690 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 CBFA2T2O43439 604 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 GJB6O95452 261 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 PLEKP08567 350 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 CISD3P0C7P0 127 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 COL9A1P20849 921 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 CASP14P31944 242 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 MAGEA9P43362 315 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 SNX16P57768 344 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 TBX2Q13207 712 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 PPP1R15BQ5SWA1 713 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 FAM102AQ5T9C2 384 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 ACAD10Q6JQN1 1059 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 WDR59Q6PJI9 974 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 JOSD2Q8TAC2 188 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 PGAP3Q96FM1 320 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 CLEC4EQ9ULY5 219 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 NENFQ9UMX5 172 aa20.29■□□□□ 0.84
SHKBP1-221ENST00000599833 GOLGA6L7A0A1B0GV03 622 aa20.28■□□□□ 0.84
SHKBP1-221ENST00000599833 TULP3O75386 442 aa20.28■□□□□ 0.84
SHKBP1-221ENST00000599833 CCDC172P0C7W6 258 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms