RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 C4orf47A7E2U8 309 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 PIK3R2O00459 728 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 PMM2O15305 246 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 NDUFV2P19404 249 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 RGS7P49802 495 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 MFAP3P55082 362 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 IRX4P78413 519 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 BSPRYQ5W0U4 402 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 LCLAT1Q6UWP7 414 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 FMNL3Q8IVF7 1028 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 PPM1KQ8N3J5 372 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 KCTD13Q8WZ19 329 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 SPACA7Q96KW9 195 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 NT5C1BQ96P26 610 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 KIAA1257Q9ULG3 409 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 STRIP2Q9ULQ0 834 aa23.96■■□□□ 1.43
CCDC61-207ENST00000599044 KHNYNO15037 678 aaKnown RBP23.95■■□□□ 1.42
CCDC61-207ENST00000599044 LCP1P13796 627 aa23.95■■□□□ 1.42
CCDC61-207ENST00000599044 BRD2P25440 801 aaKnown RBP23.95■■□□□ 1.42
CCDC61-207ENST00000599044 CHKAP35790 457 aa23.95■■□□□ 1.42
CCDC61-207ENST00000599044 TRIP4Q15650 581 aaPredicted RBP23.95■■□□□ 1.42
CCDC61-207ENST00000599044 PMF1Q6P1K2 205 aa23.95■■□□□ 1.42
CCDC61-207ENST00000599044 SLC35F5Q8WV83 523 aa23.95■■□□□ 1.42
CCDC61-207ENST00000599044 PIWIL1Q96J94 861 aaKnown RBP23.95■■□□□ 1.42
CCDC61-207ENST00000599044 LSM14BQ9BX40 385 aaKnown RBP23.95■■□□□ 1.42
CCDC61-207ENST00000599044 SLC27A6Q9Y2P4 619 aa23.95■■□□□ 1.42
CCDC61-207ENST00000599044 CEP192Q8TEP8 1941 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 GON4LQ3T8J9 2241 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 ATXN2Q99700 1313 aaKnown RBP23.94■■□□□ 1.42
CCDC61-207ENST00000599044 CDX4O14627 284 aaPredicted RBP23.94■■□□□ 1.42
CCDC61-207ENST00000599044 PAEPP09466 180 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 PPP1R2P41236 205 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 N4BP2L1Q5TBK1 243 aaPredicted RBP23.94■■□□□ 1.42
CCDC61-207ENST00000599044 SDE2Q6IQ49 451 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 TRIM59Q8IWR1 403 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 FAM217AQ8IXS0 508 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 CPXM2Q8N436 756 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 EHBP1Q8NDI1 1231 aa23.94■■□□□ 1.42
CCDC61-207ENST00000599044 DDX1Q92499 740 aaKnown RBP23.94■■□□□ 1.42
CCDC61-207ENST00000599044 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.94■■□□□ 1.42
CCDC61-207ENST00000599044 IGHV1OR15-9A0A0B4J2B8 117 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 MSI1O43347 362 aaKnown RBP23.93■■□□□ 1.42
CCDC61-207ENST00000599044 TSPAN3O60637 253 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 SETSIPP0DME0 302 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 ITPKAP23677 461 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 DAOAP59103 153 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 KCNH2Q12809 1159 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 CNGA2Q16280 664 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 SIX6OS1Q8N1H7 587 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 CLEC4CQ8WTT0 213 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 PLD4Q96BZ4 506 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 KREMEN1Q96MU8 473 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 SRRTQ9BXP5 876 aaKnown RBP23.93■■□□□ 1.42
CCDC61-207ENST00000599044 STON1Q9Y6Q2 735 aa23.93■■□□□ 1.42
CCDC61-207ENST00000599044 RPL6Q02878 288 aaKnown RBP23.92■■□□□ 1.42
CCDC61-207ENST00000599044 BYSLQ13895 437 aaKnown RBP23.92■■□□□ 1.42
CCDC61-207ENST00000599044 TMEM215Q68D42 235 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 FOXR2Q6PJQ5 311 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 RBBP8NLQ8NC74 664 aaPredicted RBP23.92■■□□□ 1.42
CCDC61-207ENST00000599044 DDI1Q8WTU0 396 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 RNF139Q8WU17 664 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 SORCS1Q8WY21 1168 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 MRGPRX1Q96LB2 322 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 GBP4Q96PP9 640 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 FSCN3Q9NQT6 498 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 CNGB3Q9NQW8 809 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 CYP8B1Q9UNU6 501 aa23.92■■□□□ 1.42
CCDC61-207ENST00000599044 BICDL2A1A5D9 508 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 M0QYV0 167 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 GFRA2O00451 464 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 P4HA2O15460 535 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 KCNK5O95279 499 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 IL12RB1P42701 662 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 ZNF132P52740 706 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 PAK1Q13153 545 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 TRIM61Q5EBN2 209 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 LYSMD4Q5XG99 296 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 SYT12Q8IV01 421 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 SCML4Q8N228 414 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 ABCC13Q9NSE7 274 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 OLA1Q9NTK5 396 aaKnown RBP23.91■■□□□ 1.42
CCDC61-207ENST00000599044 THAP10Q9P2Z0 257 aaPredicted RBP23.91■■□□□ 1.42
CCDC61-207ENST00000599044 PILRBQ9UKJ0 227 aa23.91■■□□□ 1.42
CCDC61-207ENST00000599044 HBS1LQ9Y450 684 aaKnown RBP23.91■■□□□ 1.42
CCDC61-207ENST00000599044 ASCC3Q8N3C0 2202 aaKnown RBP23.9■■□□□ 1.42
CCDC61-207ENST00000599044 GIPC1O14908 333 aa23.9■■□□□ 1.42
CCDC61-207ENST00000599044 MARSP56192 900 aaKnown RBP23.9■■□□□ 1.42
CCDC61-207ENST00000599044 ENPP2Q13822 863 aa23.9■■□□□ 1.42
CCDC61-207ENST00000599044 FUT11Q495W5 492 aa23.9■■□□□ 1.42
CCDC61-207ENST00000599044 SPDYCQ5MJ68 293 aa23.9■■□□□ 1.42
CCDC61-207ENST00000599044 SLC41A1Q8IVJ1 513 aa23.9■■□□□ 1.42
CCDC61-207ENST00000599044 MED15Q96RN5 788 aa23.9■■□□□ 1.42
CCDC61-207ENST00000599044 INTS2Q9H0H0 1204 aaKnown RBP23.9■■□□□ 1.42
CCDC61-207ENST00000599044 EVLQ9UI08 416 aaPredicted RBP23.9■■□□□ 1.42
CCDC61-207ENST00000599044 AFPP02771 609 aaKnown RBP23.89■■□□□ 1.41
CCDC61-207ENST00000599044 CYBBP04839 570 aa23.89■■□□□ 1.41
CCDC61-207ENST00000599044 HOXD9P28356 352 aaPredicted RBP23.89■■□□□ 1.41
CCDC61-207ENST00000599044 HARS2P49590 506 aaKnown RBP23.89■■□□□ 1.41
CCDC61-207ENST00000599044 SGSHP51688 502 aa23.89■■□□□ 1.41
CCDC61-207ENST00000599044 GCNT1Q02742 428 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms