RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 INSL5Q9Y5Q6 135 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 MYH10P35580 1976 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 A0A0A6YYK5 440 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 MACROD2A1Z1Q3 448 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 BTNL10A8MVZ5 291 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 HHLA1C9JL84 531 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 PJA2O43164 708 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 SOAT2O75908 522 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 RTN3O95197 1032 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 C1RP00736 705 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 LRG1P02750 347 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 CAPNS1P04632 268 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 CYP1A2P05177 515 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 SCNN1AP37088 669 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 NOP2P46087 812 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 RPL34P49207 117 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 GPR15P49685 360 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 NOVA1P51513 510 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 CCR3P51677 355 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 EPHB3P54753 998 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 PTP4A2Q12974 167 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 ZNF268Q14587 947 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 IFI16Q16666 785 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 DDR2Q16832 855 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 RAB41Q5JT25 222 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 SDHAF4Q5VUM1 108 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 ZNF662Q6ZS27 426 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 DENND5BQ6ZUT9 1274 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 MTSS1LQ765P7 747 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 GPRIN1Q7Z2K8 1008 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 PHLDB2Q86SQ0 1253 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 ITIH5Q86UX2 942 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 NUP93Q8N1F7 819 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 ELMOD1Q8N336 334 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 C12orf50Q8NA57 414 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 SLC7A14Q8TBB6 771 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 ARHGEF26Q96DR7 871 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 CALR3Q96L12 384 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 IER2Q9BTL4 223 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 TRIM62Q9BVG3 475 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 NUP85Q9BW27 656 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 UVRAGQ9P2Y5 699 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 TJP2Q9UDY2 1190 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 CDH7Q9ULB5 785 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 GUCA1BQ9UMX6 200 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 TFR2Q9UP52 801 aa12.61□□□□□ -0.39
SHKBP1-213ENST00000597325 RCCD1A6NED2 376 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 PAPSS1O43252 624 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 SEC24AO95486 1093 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 ZBED1O96006 694 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 C8AP07357 584 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 SPATA31D3P0C874 917 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 CSH1P0DML2 217 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 CSH2P0DML3 217 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 DESP17661 470 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 ATF6P18850 670 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 SATB1Q01826 763 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 TWF1Q12792 350 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 EFHC1Q5JVL4 640 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 PLA2G2CQ5R387 149 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 PPM1LQ5SGD2 360 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 DCUN1D2Q6PH85 259 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 OLFML1Q6UWY5 402 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 SPATA31D4Q6ZUB0 917 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 RTL10Q7L3V2 364 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 SCUBE3Q8IX30 993 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 ZNF564Q8TBZ8 553 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 GIPC2Q8TF65 315 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 IRGQQ8WZA9 623 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 FBXO32Q969P5 355 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 FAM149B1Q96BN6 582 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 ALS2CR12Q96Q35 445 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 ULBP1Q9BZM6 244 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 LACRTQ9GZZ8 138 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 ARRDC1-AS1Q9H2J1 176 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 PIDD1Q9HB75 910 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 METTL5Q9NRN9 209 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 HEBP1Q9NRV9 189 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 KCND1Q9NSA2 647 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 TRIM10Q9UDY6 481 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 LCMT1Q9UIC8 334 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 MRPS17Q9Y2R5 130 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 SPAG17Q6Q759 2223 aa12.6□□□□□ -0.39
SHKBP1-213ENST00000597325 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 A0A0U1RQJ8 604 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 SLC38A8A6NNN8 435 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 USP27XA6NNY8 438 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 CHURC1-FNTBB4DL54 471 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 TNFRSF10BO14763 440 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 KIF5CO60282 957 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 HSF2BPO75031 334 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 USP17L7P0C7H9 530 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 KRT3P12035 628 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms