RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 SLC39A13Q96H72 371 aa16.15■□□□□ 0.18
SMCO4-206ENST00000596676 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
SMCO4-206ENST00000596676 LACRTQ9GZZ8 138 aa16.15■□□□□ 0.18
SMCO4-206ENST00000596676 CTTNBP2NLQ9P2B4 639 aa16.15■□□□□ 0.18
SMCO4-206ENST00000596676 TRIM10Q9UDY6 481 aa16.15■□□□□ 0.18
SMCO4-206ENST00000596676 SALL4Q9UJQ4 1053 aa16.15■□□□□ 0.18
SMCO4-206ENST00000596676 SNX10Q9Y5X0 201 aa16.15■□□□□ 0.18
SMCO4-206ENST00000596676 GOLGA6L7A0A1B0GV03 622 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 TRDMT1O14717 391 aaKnown RBP16.14■□□□□ 0.17
SMCO4-206ENST00000596676 MOCS2O96007 188 aaPredicted RBP16.14■□□□□ 0.17
SMCO4-206ENST00000596676 IGLV3-27P01718 113 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 ARSAP15289 507 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 CORO1AP31146 461 aaKnown RBP16.14■□□□□ 0.17
SMCO4-206ENST00000596676 VCPP55072 806 aaKnown RBP16.14■□□□□ 0.17
SMCO4-206ENST00000596676 DEUP1Q05D60 604 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 TNK2Q07912 1038 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 SPA17Q15506 151 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 ARCQ7LC44 396 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 BNIPLQ7Z465 357 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 RNF135Q8IUD6 432 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 DENND1CQ8IV53 801 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 MYEOVQ96EZ4 313 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 ZMYM5Q9UJ78 669 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 ANAPC7Q9UJX3 599 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 SH3BP1Q9Y3L3 701 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 HBS1LQ9Y450 684 aaKnown RBP16.14■□□□□ 0.17
SMCO4-206ENST00000596676 ADGRG1Q9Y653 693 aa16.14■□□□□ 0.17
SMCO4-206ENST00000596676 TMEM110-MUSTN1A8MSY1 372 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 TCF4P15884 667 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 PSMA2P25787 234 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 GDI1P31150 447 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 SDC4P31431 198 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 GGCXP38435 758 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 PTPN9P43378 593 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 ZNF143P52747 638 aaPredicted RBP16.13■□□□□ 0.17
SMCO4-206ENST00000596676 HDAC4P56524 1084 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 COG7P83436 770 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 CCDC173Q0VFZ6 552 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 C10orf76Q5T2E6 689 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 Q6ZNB5 142 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 FAM131BQ86XD5 332 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 GJD3Q8N144 294 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 CCDC112Q8NEF3 446 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 ZNF564Q8TBZ8 553 aaPredicted RBP16.13■□□□□ 0.17
SMCO4-206ENST00000596676 FAM172AQ8WUF8 416 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 CENPIQ92674 756 aaPredicted RBP16.13■□□□□ 0.17
SMCO4-206ENST00000596676 RNF34Q969K3 372 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 SERPINB11Q96P15 392 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 CNPY3Q9BT09 278 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 TRIM62Q9BVG3 475 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 KIF9Q9HAQ2 790 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 MRPL47Q9HD33 250 aaKnown RBP16.13■□□□□ 0.17
SMCO4-206ENST00000596676 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
SMCO4-206ENST00000596676 STAP1Q9ULZ2 295 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 TLR6Q9Y2C9 796 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 SCINQ9Y6U3 715 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 MYOFQ9NZM1 2061 aa16.13■□□□□ 0.17
SMCO4-206ENST00000596676 COL4A3Q01955 1670 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 E2F8A0AVK6 867 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 OTOL1A6NHN0 477 aaPredicted RBP16.12■□□□□ 0.17
SMCO4-206ENST00000596676 ARHGAP6O43182 974 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 ENDOD1O94919 500 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 TCF3P15923 654 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 PSMC3P17980 439 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 CXCR3P49682 368 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 FCHO2Q0JRZ9 810 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 NADSYN1Q6IA69 706 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 HTR3DQ70Z44 454 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 PLD4Q96BZ4 506 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 TRMT61BQ9BVS5 477 aaKnown RBP16.12■□□□□ 0.17
SMCO4-206ENST00000596676 EBF3Q9H4W6 596 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 HPS4Q9NQG7 708 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 DUS2Q9NX74 493 aaKnown RBP16.12■□□□□ 0.17
SMCO4-206ENST00000596676 OBP2AQ9NY56 170 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 IGSF9Q9P2J2 1179 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 INTUQ9ULD6 942 aa16.12■□□□□ 0.17
SMCO4-206ENST00000596676 KIF26AQ9ULI4 1882 aaPredicted RBP16.12■□□□□ 0.17
SMCO4-206ENST00000596676 KCNU1A8MYU2 1149 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 BUB1O43683 1085 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 TSPAN3O60637 253 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 GBP1P32455 592 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 RDXP35241 583 aaKnown RBP16.11■□□□□ 0.17
SMCO4-206ENST00000596676 VAV2P52735 878 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 MESDQ14696 234 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 SCYL2Q6P3W7 929 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 RFWD3Q6PCD5 774 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 KIAA1328Q86T90 577 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 DDX42Q86XP3 938 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMCO4-206ENST00000596676 YAF2Q8IY57 180 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 CCDC185Q8N715 623 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 RFFLQ8WZ73 363 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 PGAP3Q96FM1 320 aaPredicted RBP16.11■□□□□ 0.17
SMCO4-206ENST00000596676 PEBP4Q96S96 227 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
SMCO4-206ENST00000596676 FAM83CQ9BQN1 747 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 GOLPH3Q9H4A6 298 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 GPATCH2LQ9NWQ4 482 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 RRN3Q9NYV6 651 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 GTSE1Q9NYZ3 720 aa16.11■□□□□ 0.17
SMCO4-206ENST00000596676 PCSK1NQ9UHG2 260 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms