RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 HBS1LQ9Y450 684 aaKnown RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 WNT6Q9Y6F9 365 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 HELZP42694 1942 aaKnown RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 GOLGA6L7A0A1B0GV03 622 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 KRBA1A5PL33 1030 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 DPYSL4O14531 572 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 NDUFA10O95299 355 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 HMBSP08397 361 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 TPM1P09493 284 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 IRF1P10914 325 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 PDGFRAP16234 1089 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 ABCB4P21439 1286 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 GDI1P31150 447 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 SLC6A4P31645 630 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 HDAC4P56524 1084 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 SNX16P57768 344 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 COG7P83436 770 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 MESP2Q0VG99 397 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 FAM133BQ5BKY9 247 aaKnown RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 ZC3H12AQ5D1E8 599 aaKnown RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 RNF43Q68DV7 783 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 NAIF1Q69YI7 327 aaPredicted RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 LRRC8AQ8IWT6 810 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 CCDC170Q8IYT3 715 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 ZNF683Q8IZ20 524 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 DEPDC1BQ8WUY9 529 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 AZIN2Q96A70 460 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 ZNF653Q96CK0 615 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 CDK5RAP1Q96SZ6 601 aaKnown RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 BAG1Q99933 345 aaPredicted RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 TRMT61BQ9BVS5 477 aaKnown RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 KCNF1Q9H3M0 494 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 SYNCQ9H7C4 482 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 FBRSL1Q9HCM7 1045 aaKnown RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 PARVAQ9NVD7 372 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 ZNHIT6Q9NWK9 470 aaKnown RBP11.01□□□□□ -0.65
LIG1-210ENST00000596332 GTSE1Q9NYZ3 720 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 DUSP12Q9UNI6 340 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 SORCS3Q9UPU3 1222 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 TLR6Q9Y2C9 796 aa11.01□□□□□ -0.65
LIG1-210ENST00000596332 M0QYT0 321 aa11□□□□□ -0.65
LIG1-210ENST00000596332 CCP110O43303 1012 aa11□□□□□ -0.65
LIG1-210ENST00000596332 AKR1B10O60218 316 aa11□□□□□ -0.65
LIG1-210ENST00000596332 ABCB7O75027 752 aa11□□□□□ -0.65
LIG1-210ENST00000596332 TMEM253P0C7T8 217 aa11□□□□□ -0.65
LIG1-210ENST00000596332 MYBL1P10243 752 aa11□□□□□ -0.65
LIG1-210ENST00000596332 CHRM1P11229 460 aaPredicted RBP11□□□□□ -0.65
LIG1-210ENST00000596332 SRFP11831 508 aa11□□□□□ -0.65
LIG1-210ENST00000596332 TCF4P15884 667 aa11□□□□□ -0.65
LIG1-210ENST00000596332 CORO1AP31146 461 aaKnown RBP11□□□□□ -0.65
LIG1-210ENST00000596332 SGSHP51688 502 aa11□□□□□ -0.65
LIG1-210ENST00000596332 ZNF143P52747 638 aaPredicted RBP11□□□□□ -0.65
LIG1-210ENST00000596332 TBX4P57082 545 aa11□□□□□ -0.65
LIG1-210ENST00000596332 ZXDAP98168 799 aa11□□□□□ -0.65
LIG1-210ENST00000596332 FZD5Q13467 585 aa11□□□□□ -0.65
LIG1-210ENST00000596332 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
LIG1-210ENST00000596332 ARHGAP29Q52LW3 1261 aa11□□□□□ -0.65
LIG1-210ENST00000596332 DAB2IPQ5VWQ8 1189 aa11□□□□□ -0.65
LIG1-210ENST00000596332 PPP1R2P3Q6NXS1 205 aa11□□□□□ -0.65
LIG1-210ENST00000596332 DNAJC24Q6P3W2 148 aa11□□□□□ -0.65
LIG1-210ENST00000596332 RSRC2Q7L4I2 434 aaKnown RBP11□□□□□ -0.65
LIG1-210ENST00000596332 TMEM25Q86YD3 366 aa11□□□□□ -0.65
LIG1-210ENST00000596332 MSANTD4Q8NCY6 345 aa11□□□□□ -0.65
LIG1-210ENST00000596332 RNF139Q8WU17 664 aa11□□□□□ -0.65
LIG1-210ENST00000596332 PLD4Q96BZ4 506 aa11□□□□□ -0.65
LIG1-210ENST00000596332 BTBD6Q96KE9 485 aa11□□□□□ -0.65
LIG1-210ENST00000596332 MCEEQ96PE7 176 aa11□□□□□ -0.65
LIG1-210ENST00000596332 LACRTQ9GZZ8 138 aa11□□□□□ -0.65
LIG1-210ENST00000596332 EBF3Q9H4W6 596 aa11□□□□□ -0.65
LIG1-210ENST00000596332 OSGEPQ9NPF4 335 aa11□□□□□ -0.65
LIG1-210ENST00000596332 ARHGEF38Q9NXL2 777 aa11□□□□□ -0.65
LIG1-210ENST00000596332 MYO1AQ9UBC5 1043 aa11□□□□□ -0.65
LIG1-210ENST00000596332 CLEC4EQ9ULY5 219 aa11□□□□□ -0.65
LIG1-210ENST00000596332 PCDHA13Q9Y5I0 950 aa11□□□□□ -0.65
LIG1-210ENST00000596332 DUSP10Q9Y6W6 482 aa11□□□□□ -0.65
LIG1-210ENST00000596332 ANTXRLA6NF34 631 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 PI4K2BG5E9Z4 385 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 CAPN9O14815 690 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 PJA2O43164 708 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 MTA2O94776 668 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 CYP17A1P05093 508 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 H2AFZP0C0S5 128 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 GPD1P21695 349 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 SOX9P48436 509 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 SULT1E1P49888 294 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 GSDMDP57764 484 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 ATP11AP98196 1134 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 RUNX3Q13761 415 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 PPP2R5DQ14738 602 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 PIK3R6Q5UE93 754 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 TXNDC11Q6PKC3 985 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 H2AFVQ71UI9 128 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 STRADAQ7RTN6 431 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 C14orf80Q86SX3 495 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 TADA2BQ86TJ2 420 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 VPS36Q86VN1 386 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 C12orf40Q86WS4 652 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 DDX42Q86XP3 938 aaKnown RBP eCLIP10.99□□□□□ -0.65
LIG1-210ENST00000596332 DENND1CQ8IV53 801 aa10.99□□□□□ -0.65
LIG1-210ENST00000596332 ACRBPQ8NEB7 543 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms