RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 Q6ZS52 159 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 BEND5Q7L4P6 421 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 ZDHHC17Q8IUH5 632 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 SFTPA1Q8IWL2 248 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 ZNF397Q8NF99 534 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 CD101Q93033 1021 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 NELL2Q99435 816 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 P2RY13Q9BPV8 354 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 DCLK3Q9C098 648 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 METTL5Q9NRN9 209 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 PLK2Q9NYY3 685 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 CALCOCO1Q9P1Z2 691 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 CAPN11Q9UMQ6 739 aa14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 MYO18AQ92614 2054 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-207ENST00000595631 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 NEDD8-MDP1E9PL57 170 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 TRIM24O15164 1050 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 IRAK2O43187 625 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 MOCS2O96007 188 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 PLEKP08567 350 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 FLT3P36888 993 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 PRKCIP41743 596 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 NSFP46459 744 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 HARS2P49590 506 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 ZBED6P86452 979 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 GAD2Q05329 585 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 KLHL30Q0D2K2 578 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 CCINQ13939 588 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 ZC3H12AQ5D1E8 599 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 HGSNATQ68CP4 663 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 MON1BQ7L1V2 547 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 PHF13Q86YI8 300 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 VSTM4Q8IW00 320 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 EMC1Q8N766 993 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 DTWD2Q8NBA8 298 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 MSANTD4Q8NCY6 345 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 CLDN23Q96B33 292 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 SLC39A13Q96H72 371 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 SERPINB11Q96P15 392 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 TRIM62Q9BVG3 475 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 BBS2Q9BXC9 721 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 OSBPL6Q9BZF3 934 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 ADAM22Q9P0K1 906 aa14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 XPO7Q9UIA9 1087 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-207ENST00000595631 DDX3XO00571 662 aaKnown RBP eCLIP14.34□□□□□ -0.113e-6■■■□□ 15.7
SHKBP1-207ENST00000595631 HOXC11O43248 304 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 TSPAN3O60637 253 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 TYRP14679 529 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 COL9A1P20849 921 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 SLC6A4P31645 630 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 NOS2P35228 1153 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 SULT1E1P49888 294 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 SGSHP51688 502 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 CDK17Q00537 523 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 NME3Q13232 169 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 GAS6Q14393 721 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 TDRD12Q587J7 1177 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 SPECC1LQ69YQ0 1117 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 NADSYN1Q6IA69 706 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 ACAD10Q6JQN1 1059 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 PKN3Q6P5Z2 889 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 RFWD3Q6PCD5 774 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 SARM1Q6SZW1 724 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 FAM217AQ8IXS0 508 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 PRSS33Q8NF86 280 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 JOSD2Q8TAC2 188 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 TRIM5Q9C035 493 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 DDIT4Q9NX09 232 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 TMEM59LQ9UK28 342 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 TLR6Q9Y2C9 796 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 ZNF510Q9Y2H8 683 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 EML5Q05BV3 1969 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 DOCK4Q8N1I0 1966 aa14.34□□□□□ -0.11
SHKBP1-207ENST00000595631 FANCMQ8IYD8 2048 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 M0QYT0 321 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 NCAM2O15394 837 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 ATMINO43313 823 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 TULP3O75386 442 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 SCNN1AP37088 669 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 MATKP42679 507 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 ATXN1P54253 815 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 AMPD2Q01433 879 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 RING1Q06587 406 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 GRSF1Q12849 480 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 MTAPQ13126 283 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 NNTQ13423 1086 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 EIF4EBP2Q13542 120 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 LRRC32Q14392 662 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 RAB6CQ53S08 254 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 FAM133BQ5BKY9 247 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 FYB2Q5VWT5 728 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 NUGGCQ68CJ6 796 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 C1orf228Q6PIY5 440 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 ETFBKMTQ8IXQ9 262 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 PHTF2Q8N3S3 785 aa14.33□□□□□ -0.12
SHKBP1-207ENST00000595631 CPXM2Q8N436 756 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms