RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 ZNF358Q9NW07 568 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 IL1RAPL1Q9NZN1 696 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 SLC4A7Q9Y6M7 1214 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 CAPN8A6NHC0 703 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 TXNDC9O14530 226 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 ZBED1O96006 694 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 SMIM18P0DKX4 95 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 ABCD1P33897 745 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 RANBP1P43487 201 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 PCLAFQ15004 111 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 MMEL1Q495T6 779 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 SCYL2Q6P3W7 929 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 FAM83AQ86UY5 434 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 GSDMBQ8TAX9 411 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 OPTNQ96CV9 577 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 PGLYRP2Q96PD5 576 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 CCDC28BQ9BUN5 200 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 APOBEC2Q9Y235 224 aaKnown RBP17■□□□□ 0.31
SIN3B-206ENST00000595541 PSAT1Q9Y617 370 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 COMMD3-BMI1R4GMX3 469 aa17■□□□□ 0.31
SIN3B-206ENST00000595541 F7P08709 466 aaPredicted RBP16.99■□□□□ 0.31
SIN3B-206ENST00000595541 VAV1P15498 845 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 PDGFRAP16234 1089 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 CYP3A5P20815 502 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 SLC10A2Q12908 348 aaPredicted RBP16.99■□□□□ 0.31
SIN3B-206ENST00000595541 TLR1Q15399 786 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 ARCQ7LC44 396 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 SPATA24Q86W54 205 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 C10orf107Q8IVU9 208 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 REPS2Q8NFH8 660 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 RAB3IL1Q8TBN0 382 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.99■□□□□ 0.31
SIN3B-206ENST00000595541 ACTRT2Q8TDY3 377 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 DNAJC1Q96KC8 554 aaKnown RBP16.99■□□□□ 0.31
SIN3B-206ENST00000595541 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 ASNSD1Q9NWL6 643 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 BTBD7Q9P203 1132 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 MYO18AQ92614 2054 aaKnown RBP16.99■□□□□ 0.31
SIN3B-206ENST00000595541 C2CD4BA6NLJ0 364 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 M0QYV0 167 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 WNT10BO00744 389 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 ZBTB14O43829 449 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 SERPINB6P35237 376 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 MAGEA6P43360 314 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 AP3M2P53677 418 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 BCAR1P56945 870 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 NCAPG2Q86XI2 1143 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 KLC2Q9H0B6 622 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 VCX3BQ9H321 246 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 VCX3AQ9NNX9 186 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 UBAP1Q9NZ09 502 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 MOCS1Q9NZB8 636 aa16.99■□□□□ 0.31
SIN3B-206ENST00000595541 SF3B1O75533 1304 aaKnown RBP eCLIP16.98■□□□□ 0.312e-7■■■■■ 129.2
SIN3B-206ENST00000595541 TPP1O14773 563 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 OGTO15294 1046 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 PLIN3O60664 434 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 GJB1P08034 283 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 GABRB2P47870 512 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 FOLH1Q04609 750 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 PTPN11Q06124 597 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-206ENST00000595541 PRKG1Q13976 671 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 TFDP2Q14188 446 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 GK3PQ14409 553 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 TARBP2Q15633 366 aaKnown RBP16.98■□□□□ 0.31
SIN3B-206ENST00000595541 ZPBP2Q6X784 338 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 FAM81AQ8TBF8 368 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 DEPDC1BQ8WUY9 529 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 AKT1S1Q96B36 256 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 ZNF214Q9UL59 606 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-206ENST00000595541 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-206ENST00000595541 MYOCOSA0A1B0GUC4 107 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 B4GALT5O43286 388 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 EGFRP00533 1210 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 TFE3P19532 575 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-206ENST00000595541 NCF2P19878 526 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-206ENST00000595541 GPD1P21695 349 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 GBE1Q04446 702 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 WDR78Q5VTH9 848 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 EEF1DP3Q658K8 133 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
SIN3B-206ENST00000595541 PAOXQ6QHF9 649 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 TMC7Q7Z402 723 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 NETO2Q8NC67 525 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 MOCOSQ96EN8 888 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 OLFM3Q96PB7 478 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 NIFKQ9BYG3 293 aaKnown RBP16.98■□□□□ 0.31
SIN3B-206ENST00000595541 PCDH18Q9HCL0 1135 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 HSFX1Q9UBD0 423 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 ITGA11Q9UKX5 1188 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 SORCS3Q9UPU3 1222 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 INPP5FQ9Y2H2 1132 aa16.98■□□□□ 0.31
SIN3B-206ENST00000595541 DCXO43602 365 aa16.97■□□□□ 0.31
SIN3B-206ENST00000595541 PEX10O60683 326 aa16.97■□□□□ 0.31
SIN3B-206ENST00000595541 USP4Q13107 963 aa16.97■□□□□ 0.31
SIN3B-206ENST00000595541 KRT81Q14533 505 aa16.97■□□□□ 0.31
SIN3B-206ENST00000595541 GRAMD1BQ3KR37 738 aa16.97■□□□□ 0.31
SIN3B-206ENST00000595541 CCDC14Q49A88 953 aa16.97■□□□□ 0.31
SIN3B-206ENST00000595541 FAM47CQ5HY64 1035 aa16.97■□□□□ 0.31
SIN3B-206ENST00000595541 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms