RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 FAM183BPQ6ZVS7 135 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 CCDC33Q8N5R6 958 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 OR6Y1Q8NGX8 325 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 PPP1R14CQ8TAE6 165 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 CXorf38Q8TB03 319 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 ACTRT2Q8TDY3 377 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 DTNBP1Q96EV8 351 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 CLPTM1LQ96KA5 538 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 TTC1Q99614 292 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 EBF4Q9BQW3 602 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 CDT1Q9H211 546 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 SMYD3Q9H7B4 428 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 NRDE2Q9H7Z3 1164 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 ZNF395Q9H8N7 513 aaPredicted RBP13.68□□□□□ -0.22
VRK3-209ENST00000594948 UGT1A7Q9HAW7 530 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 UGT1A10Q9HAW8 530 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 UGT1A8Q9HAW9 530 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 VCX3AQ9NNX9 186 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 STK32BQ9NY57 414 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 HOXC10Q9NYD6 342 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 PLXNA1Q9UIW2 1896 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 TRIP11Q15643 1979 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 RALGAPA2Q2PPJ7 1873 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 PEX1O43933 1283 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 LGR5O75473 907 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 BAG2O95816 211 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 SERPINE1P05121 402 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 SRGAP2CP0DJJ0 459 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 KITP10721 976 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 SLC1A6P48664 564 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 POLE2P56282 527 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 TNFAIP2Q03169 654 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 UBAP2LQ14157 1087 aaKnown RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 C15orf59Q2T9L4 293 aaPredicted RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 LIN52Q52LA3 116 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 MDH1BQ5I0G3 518 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 MAP3K21Q5TCX8 1036 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 MROH9Q5TGP6 573 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 METTL7BQ6UX53 244 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 ATP2A3Q93084 1043 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 ZNF778Q96MU6 729 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 QKIQ96PU8 341 aaKnown RBP eCLIP13.67□□□□□ -0.22
VRK3-209ENST00000594948 TUBGCP5Q96RT8 1024 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 PRDM16Q9HAZ2 1276 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 PICK1Q9NRD5 415 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 MARCOQ9UEW3 520 aaPredicted RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 HMGXB4Q9UGU5 601 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 GTF2IRD1Q9UHL9 959 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 EMCNQ9ULC0 261 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 DNAJC16Q9Y2G8 782 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 CITO14578 2027 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 CASQ2O14958 399 aaPredicted RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 PLIN3O60664 434 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 CCDC130P13994 396 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 TCF7P36402 384 aaPredicted RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 FDFT1P37268 417 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 DEUP1Q05D60 604 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 NIPAL4Q0D2K0 466 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 CUL3Q13618 768 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 GRM2Q14416 872 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 KYAT1Q16773 422 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 SYCP2LQ5T4T6 812 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 SH3PXD2AQ5TCZ1 1133 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 FAXCQ5TGI0 409 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 EEF1DP3Q658K8 133 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 TRMT10BQ6PF06 316 aaKnown RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 RFX8Q6ZV50 586 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 HACE1Q8IYU2 909 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 PPP4R1Q8TF05 950 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 CDKL2Q92772 493 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 CMTM5Q96DZ9 223 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 NAT9Q9BTE0 207 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 SNRNP25Q9BV90 132 aaKnown RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 SPATA16Q9BXB7 569 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 NFKBIZQ9BYH8 718 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 EPB41L1Q9H4G0 881 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 ASB7Q9H672 318 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 EIF2B3Q9NR50 452 aaKnown RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 NDUFA13Q9P0J0 144 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 MORF4L1Q9UBU8 362 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 BARX2Q9UMQ3 279 aaPredicted RBP13.67□□□□□ -0.22
VRK3-209ENST00000594948 HEY1Q9Y5J3 304 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 MAD1L1Q9Y6D9 718 aa13.67□□□□□ -0.22
VRK3-209ENST00000594948 SPDYE16A6NNV3 312 aaPredicted RBP13.66□□□□□ -0.22
VRK3-209ENST00000594948 HACD1B0YJ81 288 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 AP1G1O43747 822 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 METTL18O95568 372 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 ITGB3P05106 788 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 NFICP08651 508 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 CXCL8P10145 99 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 MCF2P10911 925 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 UQCRBP14927 111 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 ACAT1P24752 427 aaKnown RBP13.66□□□□□ -0.22
VRK3-209ENST00000594948 RPS12P25398 132 aaKnown RBP13.66□□□□□ -0.22
VRK3-209ENST00000594948 SDC4P31431 198 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 HARS2P49590 506 aaKnown RBP13.66□□□□□ -0.22
VRK3-209ENST00000594948 HMGCS2P54868 508 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 SNX16P57768 344 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms