RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 STRIP2Q9ULQ0 834 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 F8VP50 259 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 HCRTO43612 131 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 TRPA1O75762 1119 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 ALOX15P16050 662 aaPredicted RBP15.93■□□□□ 0.14
PNKP-204ENST00000594661 CREB1P16220 341 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 SERPINB3P29508 390 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 MLH1P40692 756 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 ADARP55265 1226 aaKnown RBP15.93■□□□□ 0.14
PNKP-204ENST00000594661 PSMC1P62191 440 aaKnown RBP15.93■□□□□ 0.14
PNKP-204ENST00000594661 GSTM4Q03013 218 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 MGAT3Q09327 533 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 NFX1Q12986 1120 aaKnown RBP15.93■□□□□ 0.14
PNKP-204ENST00000594661 MPP2Q14168 576 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 SOWAHAQ2M3V2 549 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 SLC44A4Q53GD3 710 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 DSTYKQ6XUX3 929 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 ACOT1Q86TX2 421 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 XYLT1Q86Y38 959 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 RIBC1Q8N443 379 aaPredicted RBP15.93■□□□□ 0.14
PNKP-204ENST00000594661 TTC39CQ8N584 583 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 GDAP1Q8TB36 358 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 ZFP42Q96MM3 310 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 MIPEPQ99797 713 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 TRPV5Q9NQA5 729 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 SRRDQ9UH36 339 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 TSPAN16Q9UKR8 245 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 TMED5Q9Y3A6 229 aa15.93■□□□□ 0.14
PNKP-204ENST00000594661 PTGESO14684 152 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 ASMTLO95671 621 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 GAS8O95995 478 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 CD4P01730 458 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 FUT4P22083 530 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 CETN2P41208 172 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 NEK3P51956 506 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 TRIP13Q15645 432 aaPredicted RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 ATP13A4Q4VNC1 1196 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 FBXO47Q5MNV8 452 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 LCLAT1Q6UWP7 414 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 ARHGEF18Q6ZSZ5 1173 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 SYDE1Q6ZW31 735 aaPredicted RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 CCDC25Q86WR0 208 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 SCUBE1Q8IWY4 988 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 ANKRD42Q8N9B4 389 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 JOSD2Q8TAC2 188 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 FAM118BQ9BPY3 351 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 WHRNQ9P202 907 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 ZNF148Q9UQR1 794 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 PI4K2BG5E9Z4 385 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 PFKMP08237 780 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 ATF7P17544 494 aaPredicted RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 CST5P28325 142 aaPredicted RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 RFC1P35251 1148 aaPredicted RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 TAP1Q03518 808 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 PTK6Q13882 451 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 GOLGA7BQ2TAP0 167 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 PPP1R26Q5T8A7 1209 aaPredicted RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 MFSD4BQ5TF39 518 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 ZNF449Q6P9G9 518 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 ANKS1BQ7Z6G8 1248 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 LPIN3Q9BQK8 851 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 CADM1Q9BY67 442 aaKnown RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 DPEP3Q9H4B8 488 aa15.92■□□□□ 0.14
PNKP-204ENST00000594661 AGO3Q9H9G7 860 aaKnown RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 METTL5Q9NRN9 209 aaKnown RBP15.92■□□□□ 0.14
PNKP-204ENST00000594661 KRT3P12035 628 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 HOXD12P35452 270 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 THPOP40225 353 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 CCNG2Q16589 344 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 MAP3K21Q5TCX8 1036 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 RCOR2Q8IZ40 523 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 OR6B3Q8NGW1 331 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 KBTBD7Q8WVZ9 684 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 SNF8Q96H20 258 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 MLXIPLQ9NP71 852 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 TIMMDC1Q9NPL8 285 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 FAM49BQ9NUQ9 324 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 FAM105AQ9NUU6 356 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 KIAA1257Q9ULG3 409 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 KPNA7A9QM74 516 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 PIK3R2O00459 728 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 XPOTO43592 962 aaKnown RBP15.91■□□□□ 0.14
PNKP-204ENST00000594661 CBX6O95503 412 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 KRT1P04264 644 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 FGFR1P11362 822 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 ITIH2P19823 946 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 FOXN2P32314 431 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 GABRB2P47870 512 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 EMP3P54852 163 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 PIGHQ14442 188 aaPredicted RBP15.91■□□□□ 0.14
PNKP-204ENST00000594661 CFAP157Q5JU67 520 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 ZNF618Q5T7W0 954 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 KAZNQ674X7 775 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 TXNRD3NBQ6F5E7 133 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 MAP7D3Q8IWC1 876 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 EMC1Q8N766 993 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 UHMK1Q8TAS1 419 aaKnown RBP15.91■□□□□ 0.14
PNKP-204ENST00000594661 ZNF560Q96MR9 790 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 KCNK9Q9NPC2 374 aa15.91■□□□□ 0.14
PNKP-204ENST00000594661 KRT10P13645 584 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms