RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 HIP1O00291 1037 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 EML1O00423 815 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 NTN3O00634 580 aaPredicted RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 IFIT3O14879 490 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 IPO8O15397 1037 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 PRPF3O43395 683 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 CACNG3O60359 315 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 PSMD10O75832 226 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 PIAS2O75928 621 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 NOL4O94818 638 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 FOSP01100 380 aaPredicted RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 CYP3A4P08684 503 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 FURINP09958 794 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 CISD3P0C7P0 127 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 ALPPL2P10696 532 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 IRF1P10914 325 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 TYRP14679 529 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 FOSL1P15407 271 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 CYP2F1P24903 491 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 HTR1EP28566 365 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 HNRNPH3P31942 346 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 RPL9P32969 192 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 UGT1A3P35503 534 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 RFC5P40937 340 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 DGKGP49619 791 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 ATP1A2P50993 1020 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 CDH8P55286 799 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 USP46P62068 366 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 PSMC5P62195 406 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 RPS14P62263 151 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 PPP2CBP62714 309 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 PPP2CAP67775 309 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 SLC7A9P82251 487 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 CDK18Q07002 472 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 PRPF4BQ13523 1007 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 ENPP2Q13822 863 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 MXD4Q14582 209 aaPredicted RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 GEN1Q17RS7 908 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 XKR9Q5GH70 373 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 XKR4Q5GH76 650 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 LINGO4Q6UY18 593 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 TPGS1Q6ZTW0 290 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 PIK3AP1Q6ZUJ8 805 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 MAEAQ7L5Y9 396 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 TMEM135Q86UB9 458 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 FJX1Q86VR8 437 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 CACNA2D3Q8IZS8 1091 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 OR2T3Q8NH03 318 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 DNAJB8Q8NHS0 232 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 SPPL2BQ8TCT7 592 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 GANCQ8TET4 914 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 SLC5A5Q92911 643 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 HDAC11Q96DB2 347 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 SNRNP40Q96DI7 357 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 TRMT2BQ96GJ1 504 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 FUBP3Q96I24 572 aaKnown RBP eCLIP3.26□□□□□ -1.89
VRK3-204ENST00000593912 SLC45A3Q96JT2 553 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 MYOCQ99972 504 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 CCDC3Q9BQI4 270 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 LZTS2Q9BRK4 669 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 OXCT2Q9BYC2 517 aaPredicted RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 TRIM55Q9BYV6 548 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 POLR3FQ9H1D9 316 aaPredicted RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 SGK2Q9HBY8 427 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 MRS2Q9HD23 443 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 SLC38A7Q9NVC3 462 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 PRMT7Q9NVM4 692 aaPredicted RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 PLK2Q9NYY3 685 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 NLGN3Q9NZ94 848 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 UXTQ9UBK9 157 aaPredicted RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 GGT7Q9UJ14 662 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 RABGEF1Q9UJ41 708 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 PNMA8BQ9ULN7 279 aaPredicted RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 SNX14Q9Y5W7 946 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 OAS3Q9Y6K5 1087 aaKnown RBP3.26□□□□□ -1.89
VRK3-204ENST00000593912 ZGRF1Q86YA3 2104 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 SCN1AP35498 2009 aa3.26□□□□□ -1.89
VRK3-204ENST00000593912 UNC13CQ8NB66 2214 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 ANK3Q12955 4377 aaKnown RBP3.25□□□□□ -1.89
VRK3-204ENST00000593912 AKAP6Q13023 2319 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 MGAM2Q2M2H8 2515 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 MDC1Q14676 2089 aaKnown RBP3.25□□□□□ -1.89
VRK3-204ENST00000593912 NYNRINQ9P2P1 1898 aaKnown RBP3.25□□□□□ -1.89
VRK3-204ENST00000593912 EME2A4GXA9 379 aaPredicted RBP3.25□□□□□ -1.89
VRK3-204ENST00000593912 SMCO2A6NFE2 343 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.25□□□□□ -1.89
VRK3-204ENST00000593912 INAFM1C9JVW0 142 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 D6RAR5 112 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 KCNN4O15554 427 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 RFPL1O75677 317 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 RTN3O95197 1032 aaPredicted RBP3.25□□□□□ -1.89
VRK3-204ENST00000593912 LY6G6DO95868 133 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 ABL1P00519 1130 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 DNTTP04053 509 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 HEXAP06865 529 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 MBL2P11226 248 aaPredicted RBP3.25□□□□□ -1.89
VRK3-204ENST00000593912 CCL4P13236 92 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 KCNE1P15382 129 aa3.25□□□□□ -1.89
VRK3-204ENST00000593912 TYMPP19971 482 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms