RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 HS6ST2Q96MM7 605 aa5.68□□□□□ -1.5
SMAD4-216ENST00000593223 SNX18Q96RF0 628 aa5.68□□□□□ -1.5
SMAD4-216ENST00000593223 RPS6KC1Q96S38 1066 aa5.68□□□□□ -1.5
SMAD4-216ENST00000593223 USP29Q9HBJ7 922 aa5.68□□□□□ -1.5
SMAD4-216ENST00000593223 SERGEFQ9UGK8 458 aa5.68□□□□□ -1.5
SMAD4-216ENST00000593223 SLC39A10Q9ULF5 831 aa5.68□□□□□ -1.5
SMAD4-216ENST00000593223 COL15A1P39059 1388 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 MANSC4A6NHS7 340 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-216ENST00000593223 WDHD1O75717 1129 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-216ENST00000593223 VIPP01282 170 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 SETSIPP0DME0 302 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 DRD1P21728 446 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 CD38P28907 300 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 SLC5A2P31639 672 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 MCM5P33992 734 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 PPM1AP35813 382 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 RENBPP51606 427 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 TXNL4AP83876 142 aaKnown RBP5.67□□□□□ -1.5
SMAD4-216ENST00000593223 SLC5A9Q2M3M2 681 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 P3H1Q32P28 736 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 PRAMEF17Q5VTA0 474 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 C1orf228Q6PIY5 440 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 ZNF788Q6ZQV5 615 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 FAM43BQ6ZT52 329 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-216ENST00000593223 SAMD3Q8N6K7 520 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 PNLDC1Q8NA58 520 aaKnown RBP5.67□□□□□ -1.5
SMAD4-216ENST00000593223 HASPINQ8TF76 798 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 TM7SF3Q9NS93 570 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 SWAP70Q9UH65 585 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 ASAP1Q9ULH1 1129 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 DAAM1Q9Y4D1 1078 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 RPS6KL1Q9Y6S9 549 aa5.67□□□□□ -1.5
SMAD4-216ENST00000593223 RNF17Q9BXT8 1623 aaKnown RBP5.66□□□□□ -1.5
SMAD4-216ENST00000593223 STRCP1A6NGW2 1772 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 UBE2Q2LH0YL09 131 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 ANP32CO43423 234 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 CA12O43570 354 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 PLA2G6O60733 806 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 ZNF37AP17032 561 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-216ENST00000593223 CALRP27797 417 aaKnown RBP5.66□□□□□ -1.5
SMAD4-216ENST00000593223 HTR7P34969 479 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 HTR3AP46098 478 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 DEUP1Q05D60 604 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 NSUN2Q08J23 767 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMAD4-216ENST00000593223 MYBPC2Q14324 1141 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 RAB30Q15771 203 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 CERKLQ49MI3 558 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-216ENST00000593223 DPY19L2P1Q6NXN4 242 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 GGT6Q6P531 493 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 TOGARAM2Q6ZUX3 1019 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 PTF1AQ7RTS3 328 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 BCDIN3DQ7Z5W3 292 aaKnown RBP5.66□□□□□ -1.5
SMAD4-216ENST00000593223 TTC30AQ86WT1 665 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 RASGRP3Q8IV61 690 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 PNPLA1Q8N8W4 532 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 FAM71DQ8N9W8 422 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 CCDC17Q96LX7 622 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 EIF3CQ99613 913 aaKnown RBP5.66□□□□□ -1.5
SMAD4-216ENST00000593223 GDF15Q99988 308 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 STK33Q9BYT3 514 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 NEURL4Q96JN8 1562 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 AOX1Q06278 1338 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 JCADQ9P266 1359 aa5.66□□□□□ -1.5
SMAD4-216ENST00000593223 IQGAP2Q13576 1575 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 H7C1Q1 480 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 CCER2I3L3R5 266 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 ADAMTS3O15072 1205 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 PBX1P40424 430 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 DGKQP52824 942 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 NHLH1Q02575 133 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 BFSP2Q13515 415 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 ATP1A4Q13733 1029 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 ACOX1Q15067 660 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 TMTC4Q5T4D3 741 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 ARL6IP4Q66PJ3 421 aaKnown RBP5.65□□□□□ -1.5
SMAD4-216ENST00000593223 TMEM65Q6PI78 240 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 VPS37AQ8NEZ2 397 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 IPO4Q8TEX9 1081 aaKnown RBP5.65□□□□□ -1.5
SMAD4-216ENST00000593223 C18orf8Q96DM3 657 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 ZNF764Q96H86 408 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-216ENST00000593223 TMEM41AQ96HV5 264 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 FYTTD1Q96QD9 318 aaKnown RBP5.65□□□□□ -1.5
SMAD4-216ENST00000593223 CINPQ9BW66 212 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-216ENST00000593223 NECTIN3Q9NQS3 549 aa5.65□□□□□ -1.5
SMAD4-216ENST00000593223 SUPT6HQ7KZ85 1726 aaKnown RBP5.65□□□□□ -1.51
SMAD4-216ENST00000593223 NPATQ14207 1427 aa5.65□□□□□ -1.51
SMAD4-216ENST00000593223 ABCA8O94911 1581 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 POC1B-GALNT4F8VUJ3 575 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 MASP2O00187 686 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 PIP5K1BO14986 540 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 MT-CO3P00414 261 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 PRKCGP05129 697 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 GSTM5P46439 218 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 PROK1P58294 105 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 TUBA4AP68366 448 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 RBM6P78332 1123 aaKnown RBP5.64□□□□□ -1.51
SMAD4-216ENST00000593223 CCDC15Q0P6D6 951 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 MTAPQ13126 283 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 FHL3Q13643 280 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 FAM187BQ17R55 369 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms