RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TRIM49BA6NDI0 452 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 CD19P15391 556 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 IL12RB1P42701 662 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 FKBP3Q00688 224 aaKnown RBP21.43■■□□□ 1.02
TRIM47-207ENST00000593089 LRMPQ12912 555 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 FUT11Q495W5 492 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 SGO2Q562F6 1265 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 PM20D1Q6GTS8 502 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 RABEPKQ7Z6M1 372 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 RGL4Q8IZJ4 473 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 DDI1Q8WTU0 396 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 UCMAQ8WVF2 138 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 GSDMAQ96QA5 445 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 SLC32A1Q9H598 525 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 LRRC4Q9HBW1 653 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 CAPN10Q9HC96 672 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 THAP10Q9P2Z0 257 aaPredicted RBP21.43■■□□□ 1.02
TRIM47-207ENST00000593089 HESX1Q9UBX0 185 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 CLEC4EQ9ULY5 219 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 COQ4Q9Y3A0 265 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 PCDH15Q96QU1 1955 aa21.43■■□□□ 1.02
TRIM47-207ENST00000593089 GOLGA6L4A6NEF3 574 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 XPO1O14980 1071 aaKnown RBP21.42■■□□□ 1.02
TRIM47-207ENST00000593089 TOP3BO95985 862 aaKnown RBP21.42■■□□□ 1.02
TRIM47-207ENST00000593089 BCAT1P54687 386 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 BST2Q10589 180 aaKnown RBP21.42■■□□□ 1.02
TRIM47-207ENST00000593089 COBLL1Q53SF7 1204 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 BHLHA9Q7RTU4 235 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 ANKS1BQ7Z6G8 1248 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 ZC3H3Q8IXZ2 948 aaKnown RBP21.42■■□□□ 1.02
TRIM47-207ENST00000593089 CPXM2Q8N436 756 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 HDDC3Q8N4P3 179 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 UBA3Q8TBC4 463 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 PLD4Q96BZ4 506 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 PIWIL1Q96J94 861 aaKnown RBP21.42■■□□□ 1.02
TRIM47-207ENST00000593089 PRDM16Q9HAZ2 1276 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 USP24Q9UPU5 2620 aa21.42■■□□□ 1.02
TRIM47-207ENST00000593089 C1QTNF9BB2RNN3 333 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 SMC2O95347 1197 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 C1QTNF9P0C862 333 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 YWHAEP62258 255 aaKnown RBP21.41■■□□□ 1.02
TRIM47-207ENST00000593089 ADIGQ0VDE8 80 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 SEMA3BQ13214 749 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 FMNL3Q8IVF7 1028 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 OR2I1PQ8NGU4 316 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 RNF139Q8WU17 664 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 EDEM1Q92611 657 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 SMARCE1Q969G3 411 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 ZNF419Q96HQ0 510 aaPredicted RBP21.41■■□□□ 1.02
TRIM47-207ENST00000593089 IPO9Q96P70 1041 aaKnown RBP21.41■■□□□ 1.02
TRIM47-207ENST00000593089 CIPCQ9C0C6 399 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 MKRN2Q9H000 416 aaKnown RBP21.41■■□□□ 1.02
TRIM47-207ENST00000593089 OLA1Q9NTK5 396 aaKnown RBP21.41■■□□□ 1.02
TRIM47-207ENST00000593089 ARMCX3Q9UH62 379 aaPredicted RBP21.41■■□□□ 1.02
TRIM47-207ENST00000593089 SFMBT1Q9UHJ3 866 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 WASF3Q9UPY6 502 aa21.41■■□□□ 1.02
TRIM47-207ENST00000593089 ARHGAP33O14559 1287 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 NPC1O15118 1278 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 TSPAN3O60637 253 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 OPHN1O60890 802 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 CD6P30203 668 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 LRRC63Q05C16 580 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 ZNF234Q14588 700 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 TRIP4Q15650 581 aaPredicted RBP21.4■■□□□ 1.02
TRIM47-207ENST00000593089 SYCP2LQ5T4T6 812 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 SIX6OS1Q8N1H7 587 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 MINDY1Q8N5J2 469 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 SLC35C1Q96A29 364 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 ELOVL2Q9NXB9 296 aa21.4■■□□□ 1.02
TRIM47-207ENST00000593089 SPAARA0A1B0GVQ0 90 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 YJEFN3A6XGL0 299 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 E7ENQ6 273 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 SYNCRIPO60506 623 aaKnown RBP21.39■■□□□ 1.01
TRIM47-207ENST00000593089 PROS1P07225 676 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 VDRP11473 427 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 MAOBP27338 520 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 HARS2P49590 506 aaKnown RBP21.39■■□□□ 1.01
TRIM47-207ENST00000593089 ENPP2Q13822 863 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 PLEKHG6Q3KR16 790 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 BSPRYQ5W0U4 402 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 ISM2Q6H9L7 571 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 UNQ6494/PRO21346Q6UXR6 183 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 PIP4P1Q86T03 277 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 FAM217AQ8IXS0 508 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 UBR7Q8N806 425 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 ENGASEQ8NFI3 743 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 SORCS1Q8WY21 1168 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 FOXJ1Q92949 421 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 TOE1Q96GM8 510 aaKnown RBP21.39■■□□□ 1.01
TRIM47-207ENST00000593089 SCNM1Q9BWG6 230 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 SLC2A11Q9BYW1 496 aa21.39■■□□□ 1.01
TRIM47-207ENST00000593089 MEI4A8MW99 385 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 O00370 1275 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 SYPP08247 313 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 LCP1P13796 627 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 TBXAS1P24557 533 aaPredicted RBP21.38■■□□□ 1.01
TRIM47-207ENST00000593089 PRKCHP24723 683 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 ZNF132P52740 706 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 ARID5AQ03989 594 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 EIF4HQ15056 248 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms