RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 TAC4Q86UU9 113 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 ZDHHC17Q8IUH5 632 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 SFTPA1Q8IWL2 248 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 CPXM2Q8N436 756 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 NAT16Q8N8M0 369 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 NUP58Q9BVL2 599 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 C2orf42Q9NWW7 574 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 CALCOCO1Q9P1Z2 691 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 TMEM59LQ9UK28 342 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 FBXO10Q9UK96 956 aa15.96■□□□□ 0.15
TRIM47-206ENST00000592942 ATG2BQ96BY7 2078 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 A0A1W2PQJ5 194 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 K7EQS6 105 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 CAPN9O14815 690 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 TRIM24O15164 1050 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 HSF2BPO75031 334 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 TRUB2O95900 331 aaKnown RBP15.95■□□□□ 0.14
TRIM47-206ENST00000592942 ADH1CP00326 375 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 DRD1P21728 446 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 SCNN1AP37088 669 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 EIF2DP41214 584 aaKnown RBP15.95■□□□□ 0.14
TRIM47-206ENST00000592942 PRKCIP41743 596 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 MAGEA9P43362 315 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 TBX4P57082 545 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 SNX16P57768 344 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 CENPCQ03188 943 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 GRSF1Q12849 480 aaKnown RBP eCLIP15.95■□□□□ 0.14
TRIM47-206ENST00000592942 NNTQ13423 1086 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 OTUD1Q5VV17 481 aaPredicted RBP15.95■□□□□ 0.14
TRIM47-206ENST00000592942 FYB2Q5VWT5 728 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 TRNP1Q6NT89 227 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 PKN3Q6P5Z2 889 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 Q6ZS52 159 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 TPGS1Q6ZTW0 290 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 ZNF571Q7Z3V5 609 aaPredicted RBP15.95■□□□□ 0.14
TRIM47-206ENST00000592942 GAS2L3Q86XJ1 694 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 C1orf210Q8IVY1 113 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 IPO4Q8TEX9 1081 aaKnown RBP15.95■□□□□ 0.14
TRIM47-206ENST00000592942 NT5C3BQ969T7 300 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 AZIN2Q96A70 460 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 HAUS4Q9H6D7 363 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 SYNCQ9H7C4 482 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 CAPN11Q9UMQ6 739 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 TLR6Q9Y2C9 796 aa15.95■□□□□ 0.14
TRIM47-206ENST00000592942 USP34Q70CQ2 3546 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 GOLGA6L7A0A1B0GV03 622 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 IRAK2O43187 625 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 TULP3O75386 442 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 PENKP01210 267 aaPredicted RBP15.94■□□□□ 0.14
TRIM47-206ENST00000592942 CISD3P0C7P0 127 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 TYRP14679 529 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 TFE3P19532 575 aaPredicted RBP15.94■□□□□ 0.14
TRIM47-206ENST00000592942 NOS2P35228 1153 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 CHKAP35790 457 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 HARS2P49590 506 aaKnown RBP15.94■□□□□ 0.14
TRIM47-206ENST00000592942 ANO4Q32M45 955 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 FAM133BQ5BKY9 247 aaKnown RBP15.94■□□□□ 0.14
TRIM47-206ENST00000592942 SFMBT2Q5VUG0 894 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 HGSNATQ68CP4 663 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 NADSYN1Q6IA69 706 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 MMS22LQ6ZRQ5 1243 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 TOGARAM2Q6ZUX3 1019 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 PHLDB2Q86SQ0 1253 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 PHF13Q86YI8 300 aaPredicted RBP15.94■□□□□ 0.14
TRIM47-206ENST00000592942 SYNPOQ8N3V7 929 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 PNKPQ96T60 521 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 NPY6RQ99463 290 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 PRRX2Q99811 253 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 TRIM62Q9BVG3 475 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 RBSNQ9H1K0 784 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 TAS2R14Q9NYV8 317 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 PLK2Q9NYY3 685 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 WDR35Q9P2L0 1181 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 XPO7Q9UIA9 1087 aaKnown RBP15.94■□□□□ 0.14
TRIM47-206ENST00000592942 CLEC4EQ9ULY5 219 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 ITIH6Q6UXX5 1313 aa15.94■□□□□ 0.14
TRIM47-206ENST00000592942 TCRBV5S1A1TA0A578 114 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 KCNU1A8MYU2 1149 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 H0Y858 1186 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 CACNG3O60359 315 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 DAB1O75553 588 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 LATS1O95835 1130 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 GYPCP04921 128 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 CCDC172P0C7W6 258 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 SKILP12757 684 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 HOXC13P31276 330 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 SLC6A4P31645 630 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 FLT3P36888 993 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 MATKP42679 507 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 RNASE9P60153 205 aaKnown RBP15.93■□□□□ 0.14
TRIM47-206ENST00000592942 LRRC32Q14392 662 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 ANGPT1Q15389 498 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 ASIC2Q16515 512 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 ZC3H12AQ5D1E8 599 aaKnown RBP15.93■□□□□ 0.14
TRIM47-206ENST00000592942 ADGRF1Q5T601 910 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 ARCQ7LC44 396 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 BNIPLQ7Z465 357 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 UNC45BQ8IWX7 931 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 CPLX3Q8WVH0 158 aa15.93■□□□□ 0.14
TRIM47-206ENST00000592942 MYEOVQ96EZ4 313 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms