RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CNGB3Q9NQW8 809 aa13.9□□□□□ -0.18
APOC1-209ENST00000592885 PILRBQ9UKJ0 227 aa13.9□□□□□ -0.18
APOC1-209ENST00000592885 AGO1Q9UL18 857 aaKnown RBP13.9□□□□□ -0.18
APOC1-209ENST00000592885 SLC12A8A0AV02 714 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 BICDL2A1A5D9 508 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 PATE3B3GLJ2 98 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 CDX4O14627 284 aaPredicted RBP13.89□□□□□ -0.19
APOC1-209ENST00000592885 HMBSP08397 361 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 CD19P15391 556 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 WASP42768 502 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 IRX4P78413 519 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 ADIGQ0VDE8 80 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 TRIP4Q15650 581 aaPredicted RBP13.89□□□□□ -0.19
APOC1-209ENST00000592885 DUOXA1Q1HG43 343 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 CCDC40Q4G0X9 1142 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 PKDCCQ504Y2 493 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 LCLAT1Q6UWP7 414 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 ARMCX6Q7L4S7 300 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 DENND1CQ8IV53 801 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 RNF139Q8WU17 664 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 BHMTQ93088 406 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
APOC1-209ENST00000592885 ACOX2Q99424 681 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 IRX2Q9BZI1 471 aaPredicted RBP13.89□□□□□ -0.19
APOC1-209ENST00000592885 ABCC13Q9NSE7 274 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 CACNA2D2Q9NY47 1150 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 PLK2Q9NYY3 685 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 THAP10Q9P2Z0 257 aaPredicted RBP13.89□□□□□ -0.19
APOC1-209ENST00000592885 STOML2Q9UJZ1 356 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 CKAP5Q14008 2032 aa13.89□□□□□ -0.19
APOC1-209ENST00000592885 TPRP12270 2363 aaKnown RBP13.89□□□□□ -0.19
APOC1-209ENST00000592885 CEACAM1P13688 526 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 HARS2P49590 506 aaKnown RBP13.88□□□□□ -0.19
APOC1-209ENST00000592885 NOVA1P51513 510 aaKnown RBP13.88□□□□□ -0.19
APOC1-209ENST00000592885 MPPE1Q53F39 396 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 PSAPL1Q6NUJ1 521 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 KIAA1211LQ6NV74 962 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 MSANTD2Q6P1R3 559 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 FMNL3Q8IVF7 1028 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 FRMD1Q8N878 549 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 IRGQQ8WZA9 623 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 PIWIL1Q96J94 861 aaKnown RBP13.88□□□□□ -0.19
APOC1-209ENST00000592885 MRGPRX1Q96LB2 322 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 MAN1B1Q9UKM7 699 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 SLC6A14Q9UN76 642 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 STON1Q9Y6Q2 735 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 PCDH15Q96QU1 1955 aa13.88□□□□□ -0.19
APOC1-209ENST00000592885 MUC22E2RYF6 1773 aaPredicted RBP13.87□□□□□ -0.19
APOC1-209ENST00000592885 UPK3BL1B0FP48 263 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 UPK3BL2E5RIL1 263 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 TULP2O00295 520 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 TIMM44O43615 452 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 GNA14O95837 355 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 SERPINF2P08697 491 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 ENGP17813 658 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 ITPKAP23677 461 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 MARSP56192 900 aaKnown RBP13.87□□□□□ -0.19
APOC1-209ENST00000592885 DAOAP59103 153 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 GCNT1Q02742 428 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 ZNF33AQ06730 810 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 LRMPQ12912 555 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 GEN1Q17RS7 908 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 BSPRYQ5W0U4 402 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 TTI2Q6NXR4 508 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 TMEM270Q6UE05 265 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 PPM1KQ8N3J5 372 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 ZNF557Q8N988 423 aaPredicted RBP13.87□□□□□ -0.19
APOC1-209ENST00000592885 WFIKKN2Q8TEU8 576 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 DDI1Q8WTU0 396 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 ERCC4Q92889 916 aaPredicted RBP13.87□□□□□ -0.19
APOC1-209ENST00000592885 FOXJ1Q92949 421 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 P2RY11Q96G91 374 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 TMEM74BQ9NUR3 256 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 SUSD2Q9UGT4 822 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 CYP8B1Q9UNU6 501 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.87□□□□□ -0.19
APOC1-209ENST00000592885 NFE2L3Q9Y4A8 694 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 RAD54BQ9Y620 910 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 ATXN2Q99700 1313 aaKnown RBP13.87□□□□□ -0.19
APOC1-209ENST00000592885 PI4KAP42356 2102 aa13.87□□□□□ -0.19
APOC1-209ENST00000592885 EPG5Q9HCE0 2579 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 YJEFN3A6XGL0 299 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 E7ENQ6 273 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 NDUFS2O75306 463 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
APOC1-209ENST00000592885 IL12RB1P42701 662 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 ZNF252P-AS1Q0IIN9 211 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 CNGA2Q16280 664 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 MEA1Q16626 185 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 FUT11Q495W5 492 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 SYCP2LQ5T4T6 812 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 SH3PXD2AQ5TCZ1 1133 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 NUGGCQ68CJ6 796 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 KIAA1324Q6UXG2 1013 aaKnown RBP13.86□□□□□ -0.19
APOC1-209ENST00000592885 RBBP8NLQ8NC74 664 aaPredicted RBP13.86□□□□□ -0.19
APOC1-209ENST00000592885 UBA3Q8TBC4 463 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 GOLGA1Q92805 767 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 ZNF419Q96HQ0 510 aaPredicted RBP13.86□□□□□ -0.19
APOC1-209ENST00000592885 HSFY1Q96LI6 401 aa13.86□□□□□ -0.19
APOC1-209ENST00000592885 PRDM16Q9HAZ2 1276 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms