RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 MIS12Q9H081 205 aa21.07■□□□□ 0.96
CIRBP-239ENST00000592467 SLC27A6Q9Y2P4 619 aa21.07■□□□□ 0.96
CIRBP-239ENST00000592467 SDK1Q7Z5N4 2213 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 LRP3O75074 770 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 EOGTQ5NDL2 527 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 ANO7Q6IWH7 933 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 TMEM110Q86TL2 294 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 SCUBE3Q8IX30 993 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 ABCA7Q8IZY2 2146 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 PIWIL1Q96J94 861 aaKnown RBP21.06■□□□□ 0.96
CIRBP-239ENST00000592467 LOXL4Q96JB6 756 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 GBP4Q96PP9 640 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 TJP2Q9UDY2 1190 aa21.06■□□□□ 0.96
CIRBP-239ENST00000592467 A0A1W2PQF6 199 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 KCNJ18B7U540 433 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 PAPSS1O43252 624 aaPredicted RBP21.05■□□□□ 0.96
CIRBP-239ENST00000592467 THAP12O43422 761 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 MED7O43513 233 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 EPN2O95208 641 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 CLCN1P35523 988 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 ID4P47928 161 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 KCNJ12Q14500 433 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 GEN1Q17RS7 908 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 ENOX1Q8TC92 643 aaKnown RBP21.05■□□□□ 0.96
CIRBP-239ENST00000592467 DLL3Q9NYJ7 618 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 DNAJC12Q9UKB3 198 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 TNRC6BQ9UPQ9 1833 aaKnown RBP21.05■□□□□ 0.96
CIRBP-239ENST00000592467 LAMA1P25391 3075 aa21.05■□□□□ 0.96
CIRBP-239ENST00000592467 E5RJQ4 531 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 FOXN3O00409 490 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-239ENST00000592467 LATS1O95835 1130 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 PNMA6AP0CW24 399 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-239ENST00000592467 ACADSBP45954 432 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 TCP11X2Q5H9J9 407 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 CDKAL1Q5VV42 579 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 RNF43Q68DV7 783 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 BEND5Q7L4P6 421 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 GABRG3Q99928 467 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 SEMA4GQ9NTN9 838 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 PCDHGC3Q9UN70 934 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 NAALADL1Q9UQQ1 740 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 INVSQ9Y283 1065 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 NFE2L3Q9Y4A8 694 aa21.04■□□□□ 0.96
CIRBP-239ENST00000592467 THADAQ6YHU6 1953 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 MUC22E2RYF6 1773 aaPredicted RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 PRKCSHP14314 528 aaPredicted RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 BCKDHBP21953 392 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 HOXD9P28356 352 aaPredicted RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 NTSR1P30989 418 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 HARS2P49590 506 aaKnown RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 SGSHP51688 502 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 RING1Q06587 406 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 PDCLQ13371 301 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 CSRP2Q16527 193 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 PLA2G2CQ5R387 149 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 SYPL2Q5VXT5 272 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 NUDT18Q6ZVK8 323 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 TRMT11Q7Z4G4 463 aaKnown RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 FAM71AQ8IYT1 594 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 DQX1Q8TE96 717 aaKnown RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 SLC39A13Q96H72 371 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 FCRL2Q96LA5 508 aaPredicted RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 NAA15Q9BXJ9 866 aaKnown RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 POLMQ9NP87 494 aaPredicted RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 ST7Q9NRC1 585 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 USP18Q9UMW8 372 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.03■□□□□ 0.96
CIRBP-239ENST00000592467 NUP205Q92621 2012 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 CACNA1AO00555 2505 aa21.03■□□□□ 0.96
CIRBP-239ENST00000592467 EEF1GP26641 437 aaKnown RBP21.02■□□□□ 0.96
CIRBP-239ENST00000592467 USP8P40818 1118 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 P2RY2P41231 377 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 WASP42768 502 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 EIF4EBP2Q13542 120 aaPredicted RBP21.02■□□□□ 0.96
CIRBP-239ENST00000592467 ENPP2Q13822 863 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 FAM133BQ5BKY9 247 aaKnown RBP21.02■□□□□ 0.96
CIRBP-239ENST00000592467 ADGRF1Q5T601 910 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 TMEM215Q68D42 235 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 KIAA1211LQ6NV74 962 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 FRMD1Q8N878 549 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 CPXM1Q96SM3 734 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 ARRDC1-AS1Q9H2J1 176 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 FHOD1Q9Y613 1164 aa21.02■□□□□ 0.96
CIRBP-239ENST00000592467 CKAP5Q14008 2032 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 TCRBV21S2A2A0A5A6 115 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 TSPAN3O60637 253 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 IGLV3-25P01717 112 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 NCAM1P13591 858 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 HOXB2P14652 356 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 GABRG2P18507 467 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 SLC6A4P31645 630 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 TAF5Q15542 800 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 RSPO4Q2I0M5 234 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-239ENST00000592467 MAP7D1Q3KQU3 841 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 MPPE1Q53F39 396 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 USP39Q53GS9 565 aaKnown RBP21.01■□□□□ 0.95
CIRBP-239ENST00000592467 KLHDC7AQ5VTJ3 777 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 PMS2CLQ68D20 193 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 NADSYN1Q6IA69 706 aa21.01■□□□□ 0.95
CIRBP-239ENST00000592467 PRR23CQ6ZRP0 262 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms