RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 LRRC63Q05C16 580 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 GFPT1Q06210 699 aaPredicted RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 ZNF33AQ06730 810 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 BST2Q10589 180 aaKnown RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 EIF4HQ15056 248 aaKnown RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 GOLGA7BQ2TAP0 167 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 COBLL1Q53SF7 1204 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 SGO2Q562F6 1265 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 SYCP2LQ5T4T6 812 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 ZNF658Q5TYW1 1059 aaPredicted RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 ANKS1BQ7Z6G8 1248 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 SCD5Q86SK9 330 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 PIGZQ86VD9 579 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 ANKRD52Q8NB46 1076 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 RNF139Q8WU17 664 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 FOXJ1Q92949 421 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 BHMTQ93088 406 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 IPO9Q96P70 1041 aaKnown RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 GSDMAQ96QA5 445 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 PLK2Q9NYY3 685 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 MARCH2Q9P0N8 246 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 PILRBQ9UKJ0 227 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 SLC6A14Q9UN76 642 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 CYP8B1Q9UNU6 501 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 VPS9D1Q9Y2B5 631 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 SLC27A6Q9Y2P4 619 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 ZDHHC9Q9Y397 364 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 TPRP12270 2363 aaKnown RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 A0A1W2PQF6 199 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SLC12A8A0AV02 714 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 CDX4O14627 284 aaPredicted RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 TRIM24O15164 1050 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SYNCRIPO60506 623 aaKnown RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 OPHN1O60890 802 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 ZBED1O96006 694 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SYPP08247 313 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SERPINF2P08697 491 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SETSIPP0DME0 302 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 CD19P15391 556 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 GNSP15586 552 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 ITPKAP23677 461 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 RDXP35241 583 aaKnown RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 TKTL1P51854 596 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 RAD23BP54727 409 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 PRSS12P56730 875 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 CETN1Q12798 172 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 FOXC1Q12948 553 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 CUL2Q13617 745 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 BECN1Q14457 450 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 WDR45BQ5MNZ6 344 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 TOGARAM2Q6ZUX3 1019 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SMYD4Q8IYR2 804 aaPredicted RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 RGL4Q8IZJ4 473 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SIX6OS1Q8N1H7 587 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 CPXM2Q8N436 756 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SLC4A11Q8NBS3 891 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SEMA4DQ92854 862 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 SMARCE1Q969G3 411 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 HSPA12BQ96MM6 686 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 GTPBP2Q9BX10 602 aaKnown RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 ULBP1Q9BZM6 244 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 GDPD2Q9HCC8 539 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 METTL14Q9HCE5 456 aaKnown RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 CACNA2D2Q9NY47 1150 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 ARMCX3Q9UH62 379 aaPredicted RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 TNRC6BQ9UPQ9 1833 aaKnown RBP10.62□□□□□ -0.71
VMP1-214ENST00000592106 SDK1Q7Z5N4 2213 aa10.62□□□□□ -0.71
VMP1-214ENST00000592106 ABCA7Q8IZY2 2146 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 MEI4A8MW99 385 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 PRRT4C9JH25 899 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 PSMA7O14818 248 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 LATS1O95835 1130 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 CISD3P0C7P0 127 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 ACADMP11310 421 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 VDRP11473 427 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 PRCPP42785 496 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 HARS2P49590 506 aaKnown RBP10.61□□□□□ -0.71
VMP1-214ENST00000592106 MFAP3P55082 362 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 MCCD1P59942 119 aaPredicted RBP10.61□□□□□ -0.71
VMP1-214ENST00000592106 PNOCQ13519 176 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 HNRNPDQ14103 355 aaKnown RBP10.61□□□□□ -0.71
VMP1-214ENST00000592106 RAB41Q5JT25 222 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 DENND1CQ8IV53 801 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 FRMD1Q8N878 549 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 TRIML1Q8N9V2 468 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 DEFB124Q8NES8 71 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 WFIKKN2Q8TEU8 576 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 DDI1Q8WTU0 396 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 GOLGA1Q92805 767 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 ACOX2Q99424 681 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 ARID3AQ99856 593 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 SLC2A11Q9BYW1 496 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 CIPCQ9C0C6 399 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 PRDM16Q9HAZ2 1276 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
VMP1-214ENST00000592106 FBXO10Q9UK96 956 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 TSPAN16Q9UKR8 245 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 KIAA1257Q9ULG3 409 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 COQ4Q9Y3A0 265 aa10.61□□□□□ -0.71
VMP1-214ENST00000592106 HBS1LQ9Y450 684 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms