RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 CFAP36Q96G28 342 aa16.31■□□□□ 0.2
MBD1-227ENST00000592060 SMOQ99835 787 aa16.31■□□□□ 0.2
MBD1-227ENST00000592060 TMPRSS4Q9NRS4 437 aa16.31■□□□□ 0.2
MBD1-227ENST00000592060 GIT1Q9Y2X7 761 aa16.31■□□□□ 0.2
MBD1-227ENST00000592060 ARL5CA6NH57 179 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 NRP1O14786 923 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 FYNP06241 537 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 LHX1P48742 406 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 TKTL1P51854 596 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 SEMA5AQ13591 1074 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 SYPL2Q5VXT5 272 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 PRPF39Q86UA1 669 aaKnown RBP16.3■□□□□ 0.2
MBD1-227ENST00000592060 CCDC33Q8N5R6 958 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 ZMIZ2Q8NF64 920 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 RNF139Q8WU17 664 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 SPOCK2Q92563 424 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 ALKBH8Q96BT7 664 aaKnown RBP16.3■□□□□ 0.2
MBD1-227ENST00000592060 LRRC39Q96DD0 335 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 ULBP1Q9BZM6 244 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 AGO3Q9H9G7 860 aaKnown RBP16.3■□□□□ 0.2
MBD1-227ENST00000592060 TMEM30AQ9NV96 361 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 STAP1Q9ULZ2 295 aa16.3■□□□□ 0.2
MBD1-227ENST00000592060 SF3B1O75533 1304 aaKnown RBP eCLIP16.3■□□□□ 0.29e-6■■■■■ 68.9
MBD1-227ENST00000592060 TDRD15B5MCY1 1934 aaKnown RBP16.3■□□□□ 0.2
MBD1-227ENST00000592060 H0YHG0 523 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 H3BRJ5 948 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 FBXO21O94952 628 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 SCNN1GP51170 649 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 DAOAP59103 153 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 PTK7Q13308 1070 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 PRKD1Q15139 912 aaPredicted RBP16.29■□□□□ 0.2
MBD1-227ENST00000592060 HEATR6Q6AI08 1181 aaKnown RBP16.29■□□□□ 0.2
MBD1-227ENST00000592060 LVRNQ6Q4G3 990 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 RNF169Q8NCN4 708 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 TFB1MQ8WVM0 346 aaKnown RBP16.29■□□□□ 0.2
MBD1-227ENST00000592060 PCED1BQ96HM7 432 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 PLCD4Q9BRC7 762 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 ARHGAP39Q9C0H5 1083 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 IQANK1A0A1B0GTG1 560 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 MYBPHLA2RUH7 354 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 C9IYK1 514 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 M0QYT0 321 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 ADAMTS4O75173 837 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 GSTA2P09210 222 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 PRKCHP24723 683 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 RABGGTBP53611 331 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 DNAJC3Q13217 504 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 DPYSQ14117 519 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 GALNTL6Q49A17 601 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 RAB41Q5JT25 222 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 HHATQ5VTY9 493 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 MFSD14CQ5VZR4 134 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 FAM47EQ6ZV65 393 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 SH2D5Q6ZV89 423 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 HTR3CQ8WXA8 447 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 SIGLEC10Q96LC7 697 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 PITPNM3Q9BZ71 974 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 PIGVQ9NUD9 493 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 ZC3H7BQ9UGR2 993 aaKnown RBP16.29■□□□□ 0.2
MBD1-227ENST00000592060 CDH9Q9ULB4 789 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 STARD13Q9Y3M8 1113 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.29■□□□□ 0.2
MBD1-227ENST00000592060 PTCH2Q9Y6C5 1203 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 PATJQ8NI35 1801 aa16.29■□□□□ 0.2
MBD1-227ENST00000592060 A0A0A0MRY4 1105 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 HHLA1C9JL84 531 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 TM9SF1O15321 606 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 MGEA5O60502 916 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 AP1G2O75843 785 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 RASSF9O75901 435 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 RPL9P32969 192 aaKnown RBP16.28■□□□□ 0.2
MBD1-227ENST00000592060 DEUP1Q05D60 604 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 MGAT5Q09328 741 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 FAAP100Q0VG06 881 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 RNF43Q68DV7 783 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 DSTYKQ6XUX3 929 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 ZNF276Q8N554 614 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 SERAC1Q96JX3 654 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 RMDN2Q96LZ7 410 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 SPATA13Q96N96 652 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 PAAF1Q9BRP4 392 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 SLC40A1Q9NP59 571 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 TIMM13Q9Y5L4 95 aaPredicted RBP16.28■□□□□ 0.2
MBD1-227ENST00000592060 NR2E3Q9Y5X4 410 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 CASP8AP2Q9UKL3 1982 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 PTPRDP23468 1912 aa16.28■□□□□ 0.2
MBD1-227ENST00000592060 SYNJ2BP-COX16A0A087WUM0 186 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 CASTOR2A6NHX0 329 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 YJEFN3A6XGL0 299 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 E7ENQ6 273 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 TRDMT1O14717 391 aaKnown RBP16.27■□□□□ 0.2
MBD1-227ENST00000592060 GPR182O15218 404 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 SEPT4O43236 478 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 EDF1O60869 148 aaKnown RBP16.27■□□□□ 0.2
MBD1-227ENST00000592060 FAM155BO75949 473 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 UBOX5O94941 541 aa16.27■□□□□ 0.2
MBD1-227ENST00000592060 INHBAP08476 426 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms