RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TYW5A2RUC4 315 aaKnown RBP10.49□□□□□ -0.73
BRCA1-227ENST00000591849 EPHB6O15197 1021 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-227ENST00000591849 TEX33O43247 280 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 GREM1O60565 184 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 HSF2BPO75031 334 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 TULP3O75386 442 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 GRAP2O75791 330 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 LSM8O95777 96 aaKnown RBP10.49□□□□□ -0.73
BRCA1-227ENST00000591849 MOCS2O96007 188 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-227ENST00000591849 ERBB2P04626 1255 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 GLI1P08151 1106 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 TIE1P35590 1138 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 NBL1P41271 181 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 TNFRSF4P43489 277 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 DGKGP49619 791 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 UBASH3AP57075 661 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF445P59923 1031 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 MRPS21P82921 87 aaKnown RBP10.49□□□□□ -0.73
BRCA1-227ENST00000591849 SLC6A3Q01959 620 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 MPPE1Q53F39 396 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 C10orf76Q5T2E6 689 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 NAA35Q5VZE5 725 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 SDE2Q6IQ49 451 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 TRIM72Q6ZMU5 477 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 MAMSTRQ6ZN01 415 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 FAM183BPQ6ZVS7 135 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 BEND5Q7L4P6 421 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 C12orf40Q86WS4 652 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 ZDHHC17Q8IUH5 632 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 DEFB106AQ8N104 65 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 CCDC33Q8N5R6 958 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 ADAM32Q8TC27 787 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 CPA5Q8WXQ8 436 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 NKD2Q969F2 451 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-227ENST00000591849 FAM126AQ9BYI3 521 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-227ENST00000591849 HSD3B7Q9H2F3 369 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 SEMA4AQ9H3S1 761 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 TSPY26PQ9H489 355 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 ASNSD1Q9NWL6 643 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 COX16Q9P0S2 106 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 TJP2Q9UDY2 1190 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 RAB23Q9ULC3 237 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 TLR6Q9Y2C9 796 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 EP300Q09472 2414 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF292O60281 2723 aa10.49□□□□□ -0.73
BRCA1-227ENST00000591849 GREB1Q4ZG55 1949 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 TICRRQ7Z2Z1 1910 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 WDR87Q6ZQQ6 2873 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 CACNA1AO00555 2505 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 COL4A3Q01955 1670 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 CHURC1-FNTBB4DL54 471 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 GOLGA8SH3BPF8 625 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 K7EQS6 105 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 CACNG3O60359 315 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 ACSL4O60488 711 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 KLF8O95600 359 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 LATS1O95835 1130 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 TRUB2O95900 331 aaKnown RBP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 TPM3P06753 285 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 SLC2A3P11169 496 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 FERP16591 822 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 ABCB4P21439 1286 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 FNTBP49356 437 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 JAM2P57087 298 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 FANCCQ00597 558 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 CDR2Q01850 454 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 NME3Q13232 169 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 GAS6Q14393 721 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 DMC1Q14565 340 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 TAF5Q15542 800 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 GAB4Q2WGN9 574 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 PTPN20Q4JDL3 420 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 EOGTQ5NDL2 527 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 ADGRF1Q5T601 910 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 FAM102AQ5T9C2 384 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 SYPL2Q5VXT5 272 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 SND1Q7KZF4 910 aaKnown RBP eCLIP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 TRMT11Q7Z4G4 463 aaKnown RBP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 TAC4Q86UU9 113 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 MAML2Q8IZL2 1156 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 CPXM2Q8N436 756 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 ATP6V0D2Q8N8Y2 350 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 TSTD1Q8NFU3 115 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 EPS8L1Q8TE68 723 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 USP33Q8TEY7 942 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 SLC20A1Q8WUM9 679 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 UCMAQ8WVF2 138 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 NAP1L5Q96NT1 182 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 PRMT8Q9NR22 394 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 DDIT4Q9NX09 232 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.48□□□□□ -0.73
BRCA1-227ENST00000591849 MARK1Q9P0L2 795 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 STIM2Q9P246 746 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 PCDHGA2Q9Y5H1 932 aa10.48□□□□□ -0.73
BRCA1-227ENST00000591849 DENND4CQ5VZ89 1909 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 ANAPC1Q9H1A4 1944 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 A0A1W2PQC6 194 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 ALDH1A2O94788 518 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms