RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 TRIM65Q6PJ69 517 aa20.11■□□□□ 0.81
PDCD5-207ENST00000590247 FRMD1Q8N878 549 aa20.11■□□□□ 0.81
PDCD5-207ENST00000590247 RNF139Q8WU17 664 aa20.11■□□□□ 0.81
PDCD5-207ENST00000590247 HMGB4Q8WW32 186 aa20.11■□□□□ 0.81
PDCD5-207ENST00000590247 DDX1Q92499 740 aaKnown RBP20.11■□□□□ 0.81
PDCD5-207ENST00000590247 MBD1Q9UIS9 605 aaPredicted RBP20.11■□□□□ 0.81
PDCD5-207ENST00000590247 AGO1Q9UL18 857 aaKnown RBP20.11■□□□□ 0.81
PDCD5-207ENST00000590247 SLC27A6Q9Y2P4 619 aa20.11■□□□□ 0.81
PDCD5-207ENST00000590247 SLC12A8A0AV02 714 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 YJEFN3A6XGL0 299 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 PRRT4C9JH25 899 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 E7ENQ6 273 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 LATS1O95835 1130 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 BRD2P25440 801 aaKnown RBP20.1■□□□□ 0.81
PDCD5-207ENST00000590247 RPL34P49207 117 aaKnown RBP20.1■□□□□ 0.81
PDCD5-207ENST00000590247 MAP7D1Q3KQU3 841 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 EGFLAMQ63HQ2 1017 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 MSANTD2Q6P1R3 559 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 TOGARAM2Q6ZUX3 1019 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 IRF2BP1Q8IU81 584 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 THAP9Q9H5L6 903 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 CD248Q9HCU0 757 aa20.1■□□□□ 0.81
PDCD5-207ENST00000590247 UBE2TQ9NPD8 197 aaPredicted RBP20.1■□□□□ 0.81
PDCD5-207ENST00000590247 A0A1W2PQF6 199 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 MED7O43513 233 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 CYBBP04839 570 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 ERCC5P28715 1186 aaPredicted RBP20.09■□□□□ 0.81
PDCD5-207ENST00000590247 NTSR1P30989 418 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 HARS2P49590 506 aaKnown RBP20.09■□□□□ 0.81
PDCD5-207ENST00000590247 MFAP3P55082 362 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 E2F5Q15329 346 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 CT47A1Q5JQC4 288 aaPredicted RBP20.09■□□□□ 0.81
PDCD5-207ENST00000590247 FYB2Q5VWT5 728 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 GBP6Q6ZN66 633 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 DENND1CQ8IV53 801 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 FMNL3Q8IVF7 1028 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 FAM114A1Q8IWE2 563 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 STK32AQ8WU08 396 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 ACOX2Q99424 681 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 SLC2A11Q9BYW1 496 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 IRX2Q9BZI1 471 aaPredicted RBP20.09■□□□□ 0.81
PDCD5-207ENST00000590247 BCCIPQ9P287 314 aaKnown RBP eCLIP20.09■□□□□ 0.81
PDCD5-207ENST00000590247 APEX2Q9UBZ4 518 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 DACH1Q9UI36 760 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 STOML2Q9UJZ1 356 aa20.09■□□□□ 0.81
PDCD5-207ENST00000590247 LNP1A1A4G5 178 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 GFRA2O00451 464 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 NPC1O15118 1278 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 SART1O43290 800 aaKnown RBP20.08■□□□□ 0.81
PDCD5-207ENST00000590247 GABBR2O75899 941 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 HMBSP08397 361 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 LCP1P13796 627 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 HOXB2P14652 356 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 GABRG2P18507 467 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 WASP42768 502 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 GPD2P43304 727 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 DHPSP49366 369 aaPredicted RBP20.08■□□□□ 0.81
PDCD5-207ENST00000590247 BYSLQ13895 437 aaKnown RBP20.08■□□□□ 0.81
PDCD5-207ENST00000590247 RNF43Q68DV7 783 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 CYP2U1Q7Z449 544 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 NDRG1Q92597 394 aaKnown RBP20.08■□□□□ 0.81
PDCD5-207ENST00000590247 GOLGA1Q92805 767 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 SPACA7Q96KW9 195 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 EDEM2Q9BV94 578 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 LSM14BQ9BX40 385 aaKnown RBP20.08■□□□□ 0.81
PDCD5-207ENST00000590247 NUP62CLQ9H1M0 184 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 PLK2Q9NYY3 685 aa20.08■□□□□ 0.81
PDCD5-207ENST00000590247 CKAP5Q14008 2032 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 PATE3B3GLJ2 98 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 LTFP02788 710 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 KRT5P13647 590 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 ACADSBP45954 432 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 RGS7P49802 495 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 RING1Q06587 406 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 TPD52L1Q16890 204 aaPredicted RBP20.07■□□□□ 0.8
PDCD5-207ENST00000590247 EXOC3L4Q17RC7 722 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 SDE2Q6IQ49 451 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 BEND5Q7L4P6 421 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 PGBD3Q8N328 593 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 EDEM1Q92611 657 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 BHMTQ93088 406 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 CNTNAP3BQ96NU0 1288 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 GABRG3Q99928 467 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 TRIM62Q9BVG3 475 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 CNTNAP3Q9BZ76 1288 aa20.07■□□□□ 0.8
PDCD5-207ENST00000590247 ASCC3Q8N3C0 2202 aaKnown RBP20.06■□□□□ 0.8
PDCD5-207ENST00000590247 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 ACACBO00763 2458 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 PTGER3P43115 390 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 MAN2A1Q16706 1144 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 MPPE1Q53F39 396 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 SPDYCQ5MJ68 293 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 KIAA1211LQ6NV74 962 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 LPCAT2Q7L5N7 544 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 TMEFF1Q8IYR6 380 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 ZNF606Q8WXB4 792 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 CRACR2AQ9BSW2 395 aa20.06■□□□□ 0.8
PDCD5-207ENST00000590247 C4orf47A7E2U8 309 aa20.05■□□□□ 0.8
PDCD5-207ENST00000590247 KHNYNO15037 678 aaKnown RBP20.05■□□□□ 0.8
PDCD5-207ENST00000590247 MAP3K13O43283 966 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms