RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 STARD3Q14849 445 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 PEAR1Q5VY43 1037 aaPredicted RBP18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 PM20D1Q6GTS8 502 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 KIAA1324Q6UXG2 1013 aaKnown RBP18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 MRGPRX1Q96LB2 322 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 ULBP1Q9BZM6 244 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 OLA1Q9NTK5 396 aaKnown RBP18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 TSPAN16Q9UKR8 245 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 SLC6A14Q9UN76 642 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 FRYQ5TBA9 3013 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 WASH3PC4AMC7 463 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 ZNF132P52740 706 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 BST2Q10589 180 aaKnown RBP18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 STIM1Q13586 685 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 GEN1Q17RS7 908 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 ZC3H3Q8IXZ2 948 aaKnown RBP18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 CPXM2Q8N436 756 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 DDI1Q8WTU0 396 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 RNF139Q8WU17 664 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 PLD4Q96BZ4 506 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 GTPBP2Q9BX10 602 aaKnown RBP18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 SLC32A1Q9H598 525 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 KIAA1257Q9ULG3 409 aa18.78■□□□□ 0.6
PRKCSH-211ENST00000590098 PCNX2A6NKB5 2137 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 TULP2O00295 520 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 PSMA7O14818 248 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 SYNCRIPO60506 623 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 SERPINF2P08697 491 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 VDRP11473 427 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 TBXAS1P24557 533 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 HARS2P49590 506 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 PMS1P54277 932 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 LRMPQ12912 555 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 FOXC1Q12948 553 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 SYCP2LQ5T4T6 812 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 ANKS1BQ7Z6G8 1248 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 SIX6OS1Q8N1H7 587 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 HDDC3Q8N4P3 179 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 TRIML1Q8N9V2 468 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 DEFB124Q8NES8 71 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 NDRG1Q92597 394 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 ERCC4Q92889 916 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 HSPA12BQ96MM6 686 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 SLC2A11Q9BYW1 496 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 SLC6A17Q9H1V8 727 aa18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 METTL14Q9HCE5 456 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 THAP10Q9P2Z0 257 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-211ENST00000590098 TRIM49BA6NDI0 452 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 ARID5AQ03989 594 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 ADIGQ0VDE8 80 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 BECN1Q14457 450 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 FUT11Q495W5 492 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 FMNL3Q8IVF7 1028 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 SLC41A1Q8IVJ1 513 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 RGL4Q8IZJ4 473 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 ENGASEQ8NFI3 743 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 SPATA20Q8TB22 786 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 UBA3Q8TBC4 463 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 FOXJ1Q92949 421 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 SLC35C1Q96A29 364 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 PIWIL1Q96J94 861 aaKnown RBP18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 CIPCQ9C0C6 399 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 PRDM16Q9HAZ2 1276 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 FSCN3Q9NQT6 498 aa18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 HBS1LQ9Y450 684 aaKnown RBP18.76■□□□□ 0.59
PRKCSH-211ENST00000590098 TIMM44O43615 452 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 TOP3BO95985 862 aaKnown RBP18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 SYPP08247 313 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 SETSIPP0DME0 302 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 IL12RB1P42701 662 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 NUCB2P80303 420 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 EIF4HQ15056 248 aaKnown RBP18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 TRIP4Q15650 581 aaPredicted RBP18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 MPPE1Q53F39 396 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 BSPRYQ5W0U4 402 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 BHLHA9Q7RTU4 235 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 METTL3Q86U44 580 aaKnown RBP18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 FAM217AQ8IXS0 508 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 EDEM1Q92611 657 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 ZNF419Q96HQ0 510 aaPredicted RBP18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 TIGD1Q96MW7 591 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 CAPN10Q9HC96 672 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 ABCC13Q9NSE7 274 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 ELOVL2Q9NXB9 296 aa18.75■□□□□ 0.59
PRKCSH-211ENST00000590098 CACNA1EQ15878 2313 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 O00370 1275 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 ARHGAP33O14559 1287 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 OPHN1O60890 802 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 GNSP15586 552 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 CD6P30203 668 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 PPP1R2P41236 205 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 FMO5P49326 533 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 CETN1Q12798 172 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 ZNF234Q14588 700 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 CCDC40Q4G0X9 1142 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 WDR45BQ5MNZ6 344 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 ISM2Q6H9L7 571 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 TMEM270Q6UE05 265 aa18.74■□□□□ 0.59
PRKCSH-211ENST00000590098 KCTD13Q8WZ19 329 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms