RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 ARHGAP44Q17R89 818 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 PKDCCQ504Y2 493 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 C10orf76Q5T2E6 689 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 BSPRYQ5W0U4 402 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 GRAMD4Q6IC98 578 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 DENND1BQ6P3S1 775 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 TMEM92Q6UXU6 159 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 Q6ZNB5 142 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 TOGARAM2Q6ZUX3 1019 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 BHLHA9Q7RTU4 235 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 FMNL3Q8IVF7 1028 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 ETFBKMTQ8IXQ9 262 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 PHTF2Q8N3S3 785 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 CAMKK1Q8N5S9 505 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 IL17RCQ8NAC3 791 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 CLEC4CQ8WTT0 213 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 RNF139Q8WU17 664 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 SLC35F5Q8WV83 523 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 GAB3Q8WWW8 586 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 P2RY11Q96G91 374 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 CDK5RAP1Q96SZ6 601 aaKnown RBP12.09□□□□□ -0.47
RFX1-204ENST00000588885 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 MIS12Q9H081 205 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 VPS16Q9H269 839 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 ACP6Q9NPH0 428 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 WDR35Q9P2L0 1181 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 SFMBT1Q9UHJ3 866 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 AGO1Q9UL18 857 aaKnown RBP12.09□□□□□ -0.47
RFX1-204ENST00000588885 STRIP2Q9ULQ0 834 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 MMP17Q9ULZ9 603 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
RFX1-204ENST00000588885 KIAA1549LQ6ZVL6 1849 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 THADAQ6YHU6 1953 aa12.09□□□□□ -0.47
RFX1-204ENST00000588885 DNAH14Q0VDD8 3507 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 A0A0A0MRY4 1105 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 TEX33O43247 280 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 TSPAN3O60637 253 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 TGM1P22735 817 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 KIR2DL1P43626 348 aaPredicted RBP12.08□□□□□ -0.48
RFX1-204ENST00000588885 ZNF132P52740 706 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 MRPS21P82921 87 aaKnown RBP12.08□□□□□ -0.48
RFX1-204ENST00000588885 CRY1Q16526 586 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 CACNA2D4Q7Z3S7 1137 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 ZNF276Q8N554 614 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 KCTD13Q8WZ19 329 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 MRFAP1L1Q96HT8 127 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 XPO6Q96QU8 1125 aaKnown RBP12.08□□□□□ -0.48
RFX1-204ENST00000588885 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
RFX1-204ENST00000588885 ST7Q9NRC1 585 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 NUP205Q92621 2012 aa12.08□□□□□ -0.48
RFX1-204ENST00000588885 MED19A0JLT2 244 aaPredicted RBP12.07□□□□□ -0.48
RFX1-204ENST00000588885 PRRT4C9JH25 899 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 PES1O00541 588 aaKnown RBP12.07□□□□□ -0.48
RFX1-204ENST00000588885 MSI1O43347 362 aaKnown RBP12.07□□□□□ -0.48
RFX1-204ENST00000588885 ADAM23O75077 832 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
RFX1-204ENST00000588885 CDC25BP30305 580 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 GBP1P32455 592 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 MFAP3P55082 362 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 DAOAP59103 153 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 VWA3BQ502W6 1294 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 TRIM65Q6PJ69 517 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 GBP6Q6ZN66 633 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 SCUBE3Q8IX30 993 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 PGBD3Q8N328 593 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 ZNF513Q8N8E2 541 aaPredicted RBP12.07□□□□□ -0.48
RFX1-204ENST00000588885 TERB1Q8NA31 727 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 HMGB4Q8WW32 186 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 RLN3Q8WXF3 142 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 ACOX2Q99424 681 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 DCLK3Q9C098 648 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 ARRDC1-AS1Q9H2J1 176 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 SMOC1Q9H4F8 434 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 BCCIPQ9P287 314 aaKnown RBP eCLIP12.07□□□□□ -0.48
RFX1-204ENST00000588885 EBF1Q9UH73 591 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 HCN2Q9UL51 889 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 ZNF510Q9Y2H8 683 aa12.07□□□□□ -0.48
RFX1-204ENST00000588885 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.07□□□□□ -0.48
RFX1-204ENST00000588885 LAMA1P25391 3075 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 CCDC163A0A0D9SF12 145 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 TCRBV21S2A2A0A5A6 115 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 THAP12O43422 761 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 CACNG3O60359 315 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 TPM2P07951 284 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 CISD3P0C7P0 127 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 PON1P27169 355 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 PBX1P40424 430 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 DGKGP49619 791 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 EMP3P54852 163 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 STILQ15468 1287 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 EXOC3L4Q17RC7 722 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 PREPLQ4J6C6 727 aaPredicted RBP12.06□□□□□ -0.48
RFX1-204ENST00000588885 FILIP1LQ4L180 1135 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 USP39Q53GS9 565 aaKnown RBP12.06□□□□□ -0.48
RFX1-204ENST00000588885 EOGTQ5NDL2 527 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 EGFLAMQ63HQ2 1017 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 NUDT18Q6ZVK8 323 aa12.06□□□□□ -0.48
RFX1-204ENST00000588885 TMC6Q7Z403 805 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms