RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 IKBKBO14920 756 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 GNSP15586 552 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 CORO1AP31146 461 aaKnown RBP14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 AFMP43652 599 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 MCCD1P59942 119 aaPredicted RBP14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 PPP3CAQ08209 521 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 GOLGA8FQ08AF8 430 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 GOLGA8DPQ0D2H9 430 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 CAMK2BQ13554 666 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 PPP1R26Q5T8A7 1209 aaPredicted RBP14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 PDZD3Q86UT5 571 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 TMPRSS6Q8IU80 811 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 CYFIP2Q96F07 1278 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 KIAA1522Q9P206 1035 aaPredicted RBP14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 DKK4Q9UBT3 224 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 NAGPAQ9UK23 515 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 PCDHA7Q9UN72 937 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 BTBD3Q9Y2F9 522 aa14.49□□□□□ -0.09
CLPTM1-208ENST00000588274 NUMA1Q14980 2115 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 KALRNO60229 2985 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 PDXKO00764 312 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 NPC1O15118 1278 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 BCAT2O15382 392 aaPredicted RBP14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 ATXN1LP0C7T5 689 aaKnown RBP14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 P4HA1P13674 534 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 PIK3CAP42336 1068 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 STARD3Q14849 445 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 KMT5BQ4FZB7 885 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 RAB41Q5JT25 222 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 TMPRSS7Q7RTY8 843 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 ANKS1BQ7Z6G8 1248 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 MARCH9Q86YJ5 346 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 ZC3H3Q8IXZ2 948 aaKnown RBP14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 CPXM2Q8N436 756 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 ORAI3Q9BRQ5 295 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 NIF3L1Q9GZT8 377 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 TMEM245Q9H330 911 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 CCDC86Q9H6F5 360 aaKnown RBP14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 GAREM1Q9H706 876 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 TM7SF3Q9NS93 570 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 RAXQ9Y2V3 346 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 PCDHGB2Q9Y5G2 931 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 TMEM131Q92545 1883 aa14.48□□□□□ -0.09
CLPTM1-208ENST00000588274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 C10orf142B7Z368 130 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 TRIM49P0CI25 452 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 TRIM49CP0CI26 452 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 HOXD9P28356 352 aaPredicted RBP14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 RDXP35241 583 aaKnown RBP14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 PSEN1P49768 467 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 CAMK2GQ13555 558 aaPredicted RBP14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 EIF4HQ15056 248 aaKnown RBP14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 HLA-BQ31612 363 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 CACUL1Q86Y37 369 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 SIPA1Q96FS4 1042 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 NT5C1AQ9BXI3 368 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 DUSP16Q9BY84 665 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 CYP3A43Q9HB55 503 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 ELOVL2Q9NXB9 296 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 SERTAD1Q9UHV2 236 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 EIF2B4Q9UI10 523 aaKnown RBP14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 RASAL2Q9UJF2 1139 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 TRAF3IP3Q9Y228 551 aa14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 APOBEC2Q9Y235 224 aaKnown RBP14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.47□□□□□ -0.09
CLPTM1-208ENST00000588274 A0A1B0GVT2 93 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 K7ELQ4 463 aaPredicted RBP14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 MAPK13O15264 365 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 ZBTB24O43167 697 aaPredicted RBP14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 CER1O95813 267 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 SLFN14P0C7P3 912 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 CD58P19256 250 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 HLA-FP30511 346 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 ACSL1P33121 698 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 CHKAP35790 457 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 MATKP42679 507 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 EFEMP1Q12805 493 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 PTPRNQ16849 979 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 KCNT1Q5JUK3 1230 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 KIAA0907Q7Z7F0 614 aaPredicted RBP14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 DENND1CQ8IV53 801 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 PRCCQ92733 491 aaPredicted RBP14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 PAGE5Q96GU1 130 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 ZNF396Q96N95 335 aaPredicted RBP14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 ARID3AQ99856 593 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 MIR1-1HGQ9H1L0 117 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 PCED1AQ9H1Q7 454 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 C6orf106Q9H6K1 298 aaPredicted RBP14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 SCUBE2Q9NQ36 999 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 STOML2Q9UJZ1 356 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 ZNF510Q9Y2H8 683 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 PCDHB9Q9Y5E1 797 aa14.46□□□□□ -0.09
CLPTM1-208ENST00000588274 SETXQ7Z333 2677 aaKnown RBP14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 FLRT2O43155 660 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 CLSTN1O94985 981 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 HMBSP08397 361 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 HLA-EP13747 358 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 OXTRP30559 389 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 GCLMP48507 274 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 CSNK1EP49674 416 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms