RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 DLGAP2Q9P1A6 1054 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 RCOR3Q9P2K3 495 aaPredicted RBP19.2■□□□□ 0.66
DDX39A-206ENST00000587730 HESX1Q9UBX0 185 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 A0A0G2JMZ2 1700 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 SDR42E2A6NKP2 422 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 ANPEPP15144 967 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 CYP2F1P24903 491 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 IRX4P78413 519 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 CDO1Q16878 200 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 LY6KQ17RY6 165 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 GOLGA7BQ2TAP0 167 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 TRNP1Q6NT89 227 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 TREML1Q86YW5 311 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.19■□□□□ 0.663e-14■□□□□ 9.4
DDX39A-206ENST00000587730 ZFAND2BQ8WV99 257 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 SPATA33Q96N06 139 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 SYT15Q9BQS2 421 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 PLAC1Q9HBJ0 212 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 IL1RAPL1Q9NZN1 696 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 APOBEC2Q9Y235 224 aaKnown RBP19.19■□□□□ 0.66
DDX39A-206ENST00000587730 DERAQ9Y315 318 aa19.19■□□□□ 0.66
DDX39A-206ENST00000587730 ITGBL1O95965 494 aaPredicted RBP19.18■□□□□ 0.66
DDX39A-206ENST00000587730 NRLP54845 237 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 ORC1Q13415 861 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 HIC1Q14526 733 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 SH3PXD2AQ5TCZ1 1133 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 C1orf146Q5VVC0 180 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 HEATR6Q6AI08 1181 aaKnown RBP19.18■□□□□ 0.66
DDX39A-206ENST00000587730 RIPOR1Q6ZS17 1223 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 PSTKQ8IV42 348 aaKnown RBP19.18■□□□□ 0.66
DDX39A-206ENST00000587730 GATA6Q92908 595 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 SMYD2Q9NRG4 433 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 CRABP2P29373 138 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 RPL26P61254 145 aaKnown RBP19.18■□□□□ 0.66
DDX39A-206ENST00000587730 NAIF1Q69YI7 327 aaPredicted RBP19.18■□□□□ 0.66
DDX39A-206ENST00000587730 OR52E8Q6IFG1 317 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 NCAPG2Q86XI2 1143 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 MFN1Q8IWA4 741 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 MECRQ9BV79 373 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 PDZD7Q9H5P4 517 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 DNAJC28Q9NX36 388 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 DPP3Q9NY33 737 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 ERAP1Q9NZ08 941 aa19.18■□□□□ 0.66
DDX39A-206ENST00000587730 ANK1P16157 1881 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 LTBP3Q9NS15 1303 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 SERPINE1P05121 402 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 PFKMP08237 780 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 CCDC130P13994 396 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 PEX19P40855 299 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 GARSP41250 739 aaKnown RBP19.17■□□□□ 0.66
DDX39A-206ENST00000587730 SH3BGRP55822 239 aaPredicted RBP19.17■□□□□ 0.66
DDX39A-206ENST00000587730 BMPR2Q13873 1038 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 HSDL1Q3SXM5 330 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 HSF5Q4G112 596 aaPredicted RBP19.17■□□□□ 0.66
DDX39A-206ENST00000587730 PKDCCQ504Y2 493 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 FASTKD1Q53R41 847 aaKnown RBP19.17■□□□□ 0.66
DDX39A-206ENST00000587730 MROH9Q5TGP6 573 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 MAP1SQ66K74 1059 aaPredicted RBP19.17■□□□□ 0.66
DDX39A-206ENST00000587730 ZNF534Q76KX8 674 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 UNC93AQ86WB7 457 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 DTX3LQ8TDB6 740 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 THTPAQ9BU02 230 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 BTBD7Q9P203 1132 aa19.17■□□□□ 0.66
DDX39A-206ENST00000587730 SBF1O95248 1867 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 C2orf71A6NGG8 1288 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 C22orf31O95567 290 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 PGAM1P18669 254 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 CDK7P50613 346 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 ALDH18A1P54886 795 aaKnown RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 KDSRQ06136 332 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SLC10A6Q3KNW5 377 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 FAXCQ5TGI0 409 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 MBLAC2Q68D91 279 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 LRRC8BQ6P9F7 803 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 TMEM192Q8IY95 271 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SREK1Q8WXA9 508 aaKnown RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 CENPIQ92674 756 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 PPP2R3CQ969Q6 453 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 CMTM5Q96DZ9 223 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 IFT43Q96FT9 208 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 KRT82Q9NSB4 513 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SLC7A8Q9UHI5 535 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SSX2IPQ9Y2D8 614 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 A0A0A0MRY4 1105 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 CCDC195A0A1B0GUA6 201 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 OPHN1O60890 802 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 ALOX15P16050 662 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 CYP3A5P20815 502 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 AMPD1P23109 780 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 PRDX6P30041 224 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 L1CAMP32004 1257 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 PAPOLAP51003 745 aaKnown RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 COPAP53621 1224 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 CACNA2D1P54289 1103 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 ROR2Q01974 943 aaKnown RBP19.16■□□□□ 0.66
DDX39A-206ENST00000587730 EFHC1Q5JVL4 640 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 ARHGAP17Q68EM7 881 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 DPH6Q7L8W6 267 aa19.16■□□□□ 0.66
DDX39A-206ENST00000587730 SLC26A9Q7LBE3 791 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms