RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 POLR3AO14802 1390 aaPredicted RBP5.05□□□□□ -1.6
VMP1-205ENST00000587470 EIF3AQ14152 1382 aaKnown RBP5.05□□□□□ -1.6
VMP1-205ENST00000587470 ACEP12821 1306 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 TMEM232C9JQI7 657 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 RGS10O43665 173 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 SRGAP2O75044 1071 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 GCATO75600 419 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 RASSF9O75901 435 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 RASAL1O95294 804 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 MT-CO3P00414 261 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 A1BGP04217 495 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 BRAFP15056 766 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 KLRC1P26715 233 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 TIRAPP58753 221 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 NFE2Q16621 373 aaPredicted RBP5.05□□□□□ -1.6
VMP1-205ENST00000587470 PXDC1Q5TGL8 231 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 APOA5Q6Q788 366 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 PRSS3P2Q8NHM4 247 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 ZBTB9Q96C00 473 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 CTHRC1Q96CG8 243 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 VN1R3Q9BXE9 311 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 FAM204AQ9H8W3 233 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 ELOVL5Q9NYP7 299 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 AFF4Q9UHB7 1163 aaKnown RBP5.05□□□□□ -1.6
VMP1-205ENST00000587470 SCAF8Q9UPN6 1271 aaKnown RBP5.05□□□□□ -1.6
VMP1-205ENST00000587470 NRAPQ86VF7 1730 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 TNS3Q68CZ2 1445 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 SSH2Q76I76 1423 aa5.05□□□□□ -1.6
VMP1-205ENST00000587470 SBNO1A3KN83 1393 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 RGPD3A6NKT7 1758 aaPredicted RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 COL14A1Q05707 1796 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 RGPD4Q7Z3J3 1758 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 E5RJQ4 531 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 FCHO1O14526 889 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 DSCR3O14972 297 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 CD3EAPO15446 510 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 PRPF3O43395 683 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 HSPA1AP0DMV8 641 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 HSPA1BP0DMV9 641 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 CREB1P16220 341 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 ATP5F1P24539 256 aaPredicted RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 MTHFSP49914 203 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 PLCD1P51178 756 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 CACNB3P54284 484 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 LMAN2Q12907 356 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 MAPK7Q13164 816 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 CNGA2Q16280 664 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 CACHD1Q5VU97 1274 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 NXNQ6DKJ4 435 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 RAVER1Q8IY67 606 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 NGDNQ8NEJ9 315 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 ZNF398Q8TD17 642 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 SPRTNQ9H040 489 aaPredicted RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 DHX36Q9H2U1 1008 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 TRIM36Q9NQ86 728 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 SNX15Q9NRS6 342 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 KLHL13Q9P2N7 655 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 MGAT4CQ9UBM8 478 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 QRICH2Q9H0J4 1663 aa5.04□□□□□ -1.6
VMP1-205ENST00000587470 CPSF1Q10570 1443 aaKnown RBP5.04□□□□□ -1.6
VMP1-205ENST00000587470 WDR90Q96KV7 1748 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 CD163L1Q9NR16 1453 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 H7C4K7 107 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 RRP9O43818 475 aaKnown RBP5.03□□□□□ -1.6
VMP1-205ENST00000587470 ZKSCAN1P17029 563 aaPredicted RBP5.03□□□□□ -1.6
VMP1-205ENST00000587470 NR4A2P43354 598 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
VMP1-205ENST00000587470 DIO1P49895 249 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 GATMP50440 423 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 COPB1P53618 953 aaKnown RBP5.03□□□□□ -1.6
VMP1-205ENST00000587470 TMF1P82094 1093 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 TIAL1Q01085 375 aaKnown RBP eCLIP5.03□□□□□ -1.64e-22■■■■■ 37
VMP1-205ENST00000587470 LAMB3Q13751 1172 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 ARHGEF7Q14155 803 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 SLC29A2Q14542 456 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 ZNF268Q14587 947 aaPredicted RBP5.03□□□□□ -1.6
VMP1-205ENST00000587470 RABEP1Q15276 862 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 NPY5RQ15761 445 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 ARHGAP29Q52LW3 1261 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 BHLHA9Q7RTU4 235 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 KCTD20Q7Z5Y7 419 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 KRT73Q86Y46 540 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 TCEAL8Q8IYN2 117 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 MAGEB6Q8N7X4 407 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 PIGOQ8TEQ8 1089 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 HMCESQ96FZ2 354 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 EFHD1Q9BUP0 239 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 STK31Q9BXU1 1019 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 PRDM11Q9NQV5 511 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 GAR1Q9NY12 217 aaKnown RBP5.03□□□□□ -1.6
VMP1-205ENST00000587470 LPAR3Q9UBY5 353 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 PPIP5K1Q6PFW1 1433 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 ADCY9O60503 1353 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 CACNA1IQ9P0X4 2223 aa5.03□□□□□ -1.6
VMP1-205ENST00000587470 SPRY2O43597 315 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 TMPRSS11DO60235 418 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 FMO1Q01740 532 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 PPP2R5AQ15172 486 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 LRRC41Q15345 812 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 ZNF750Q32MQ0 723 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms