RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 USP17L7P0C7H9 530 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 RALAP11233 206 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 ARSAP15289 507 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 TUBP50607 506 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 TAF10Q12962 218 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 MTAPQ13126 283 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 HS1BP3Q53T59 392 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 FAM102AQ5T9C2 384 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-205ENST00000586477 RAD9BQ6WBX8 426 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 GPRIN1Q7Z2K8 1008 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 XYLT1Q86Y38 959 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 RHOT2Q8IXI1 618 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 SCAMP5Q8TAC9 235 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 CSGALNACT1Q8TDX6 532 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 FAM149B1Q96BN6 582 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 TSGA10Q9BZW7 698 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 RNF38Q9H0F5 515 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 CHRDQ9H2X0 955 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 KIF9Q9HAQ2 790 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 ABCC13Q9NSE7 274 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 OLA1Q9NTK5 396 aaKnown RBP16.82■□□□□ 0.28
ATG4D-205ENST00000586477 SPATA6Q9NWH7 488 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-205ENST00000586477 RRN3Q9NYV6 651 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 TAS2R14Q9NYV8 317 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 UVRAGQ9P2Y5 699 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 CNOT8Q9UFF9 292 aaKnown RBP16.82■□□□□ 0.28
ATG4D-205ENST00000586477 MRPS17Q9Y2R5 130 aaKnown RBP16.82■□□□□ 0.28
ATG4D-205ENST00000586477 R4GN57 208 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 EP300Q09472 2414 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-205ENST00000586477 GPR179Q6PRD1 2367 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 ATG2BQ96BY7 2078 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 MYO16Q9Y6X6 1858 aa16.82■□□□□ 0.28
ATG4D-205ENST00000586477 ZNF840PA6NDX5 716 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 CAPN9O14815 690 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 OLFM2O95897 454 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 LTFP02788 710 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 KRT3P12035 628 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 TDGF1P13385 188 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 ABCB4P21439 1286 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 MAGEA9P43362 315 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 PGFP49763 221 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 VAV2P52735 878 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 GALCP54803 685 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 YWHAGP61981 247 aaKnown RBP eCLIP16.81■□□□□ 0.28
ATG4D-205ENST00000586477 YWHAZP63104 245 aaKnown RBP16.81■□□□□ 0.28
ATG4D-205ENST00000586477 PTP4A2Q12974 167 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 SNX30Q5VWJ9 437 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 BTBD8Q5XKL5 378 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 DCUN1D2Q6PH85 259 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 OLFML1Q6UWY5 402 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 FAM183BPQ6ZVS7 135 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 ZNF276Q8N554 614 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 EBF3Q9H4W6 596 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 C8orf33Q9H7E9 229 aaPredicted RBP16.81■□□□□ 0.28
ATG4D-205ENST00000586477 LMAN1LQ9HAT1 526 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 POPDC2Q9HBU9 364 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 PRMT8Q9NR22 394 aaPredicted RBP16.81■□□□□ 0.28
ATG4D-205ENST00000586477 RBM12Q9NTZ6 932 aaKnown RBP16.81■□□□□ 0.28
ATG4D-205ENST00000586477 STAP1Q9ULZ2 295 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 OTOGLQ3ZCN5 2332 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 MYOFQ9NZM1 2061 aa16.81■□□□□ 0.28
ATG4D-205ENST00000586477 TRAV19A0A0A6YYK7 116 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 ZSCAN12O43309 604 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 OAS1P00973 400 aaKnown RBP16.8■□□□□ 0.28
ATG4D-205ENST00000586477 CKMP06732 381 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 TCF3P15923 654 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 KPNA1P52294 538 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-205ENST00000586477 KIF5AQ12840 1032 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 MTF1Q14872 753 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 IFI16Q16666 785 aaKnown RBP16.8■□□□□ 0.28
ATG4D-205ENST00000586477 ITPRIPL2Q3MIP1 535 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 NAIF1Q69YI7 327 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-205ENST00000586477 PLEKHA7Q6IQ23 1121 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 RALGPS2Q86X27 583 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-205ENST00000586477 RNF139Q8WU17 664 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 NELL1Q92832 810 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 SEMA4AQ9H3S1 761 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 C2orf42Q9NWW7 574 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 THG1LQ9NWX6 298 aaKnown RBP16.8■□□□□ 0.28
ATG4D-205ENST00000586477 KIAA1549LQ6ZVL6 1849 aa16.8■□□□□ 0.28
ATG4D-205ENST00000586477 DMXL1Q9Y485 3027 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 A0A0A6YYK5 440 aaPredicted RBP16.79■□□□□ 0.28
ATG4D-205ENST00000586477 SIGLEC16A6NMB1 481 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 GOLGA8SH3BPF8 625 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 PIK3R2O00459 728 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 DAB1O75553 588 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 CYP1A2P05177 515 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 ZDHHC11BP0C7U3 371 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 HDCP19113 662 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 RRM1P23921 792 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 HOXC13P31276 330 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 RUNX3Q13761 415 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 PON2Q15165 354 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 BSPRYQ5W0U4 402 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 KLHDC10Q6PID8 442 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 TSSK4Q6SA08 328 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 Q6ZS52 159 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 RSRC2Q7L4I2 434 aaKnown RBP16.79■□□□□ 0.28
ATG4D-205ENST00000586477 SH3RF2Q8TEC5 729 aa16.79■□□□□ 0.28
ATG4D-205ENST00000586477 RFFLQ8WZ73 363 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms