RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 TCP10LQ8TDR4 215 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 SGSM3Q96HU1 749 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 CSPG4P5Q96PW8 444 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 TRPV6Q9H1D0 765 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC12A6Q9UHW9 1150 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 PQBP1O60828 265 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 BEST1O76090 585 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 PSMB4P28070 264 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 ETFBP38117 255 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 MMP13P45452 471 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 MSS51Q4VC12 460 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 NUDCD3Q8IVD9 361 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC25A41Q8N5S1 370 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 CD99L2Q8TCZ2 262 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 TRIB2Q92519 343 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 DOCK1Q14185 1865 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 KPNA6O60684 536 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 SHOX2O60902 331 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 ERCC2P18074 760 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 TGM2P21980 687 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 EFEMP1Q12805 493 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 TIGD5Q53EQ6 642 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 OLFML1Q6UWY5 402 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 CMASQ8NFW8 434 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC35F5Q8WV83 523 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 SEC14L1Q92503 715 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 MCUR1Q96AQ8 359 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 TLCD1Q96CP7 247 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 ERP27Q96DN0 273 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 FSD1LQ9BXM9 530 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 UBN1Q9NPG3 1134 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 MYO18AQ92614 2054 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 ALOX15BO15296 676 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 SNRPAP09012 282 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 DRD4P21917 467 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 IVDP26440 423 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 KLRC2P26717 231 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 GRIA1P42261 906 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 OASLQ15646 514 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 UNKQ9C0B0 810 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ECT2Q9H8V3 914 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 MIOSQ9NXC5 875 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 DERAQ9Y315 318 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 INCA1Q0VD86 236 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 FAM171A1Q5VUB5 890 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ZDHHC17Q8IUH5 632 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 SREK1Q8WXA9 508 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 SMARCD1Q96GM5 515 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 SENP1Q9P0U3 644 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 PPARGC1AQ9UBK2 798 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 PHTF1Q9UMS5 762 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 GNEQ9Y223 722 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ARL2BPQ9Y2Y0 163 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 XPO1O14980 1071 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 MFSD11O43934 449 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 CDH5P33151 784 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 PBX3P40426 434 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 GARSP41250 739 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 DDR2Q16832 855 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 CTXN3Q4LDR2 81 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC45A4Q5BKX6 768 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ANKRD20A2Q5SQ80 823 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ANKRD20A1Q5TYW2 823 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC26A9Q7LBE3 791 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 DCLK2Q8N568 766 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 PPP1R36Q96LQ0 422 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 LRRC37BQ96QE4 947 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 PLCD4Q9BRC7 762 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 TRIM55Q9BYV6 548 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ABCF3Q9NUQ8 709 aa12.85□□□□□ -0.35
SMARCA4-208ENST00000585799 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 BNIP3LO60238 219 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 UBOX5O94941 541 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 F7P08709 466 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 SERPINB6P35237 376 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 C10orf120Q5SQS8 335 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 RNF135Q8IUD6 432 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 SMG8Q8ND04 991 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 SCAMP5Q8TAC9 235 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 EMID1Q96A84 441 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 B3GALT6Q96L58 329 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 OR12D3Q9UGF7 316 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 GTF2IRD1Q9UHL9 959 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC27A5Q9Y2P5 690 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 KIAA0100Q14667 2235 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 TCRBV9S1A1TA0A576 114 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 ARHGAP42A6NI28 874 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 NRP1O14786 923 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 SEPT4O43236 478 aa12.84□□□□□ -0.35
SMARCA4-208ENST00000585799 CA12O43570 354 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms