RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 GJB3O75712 270 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 INHBAP08476 426 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 ARL1P40616 181 aaPredicted RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 MDH1P40925 334 aaKnown RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 MSH2P43246 934 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 GLRBP48167 497 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 MBTPS1Q14703 1052 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 CCNG2Q16589 344 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 KBTBD12Q3ZCT8 623 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 LDB1Q86U70 411 aaPredicted RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 MYLIPQ8WY64 445 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 GKN1Q9NS71 199 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 CPSF2Q9P2I0 782 aaKnown RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 ZMYND8Q9ULU4 1186 aaPredicted RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 PCDHB7Q9Y5E2 793 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 CDY1Q9Y6F8 540 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 FAM169AQ9Y6X4 670 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 A0A1W2PQ45 241 aaPredicted RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 A0A1W2PQY0 241 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 BTNL10A8MVZ5 291 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 ABCD1P33897 745 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 SRLQ86TD4 932 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 RBM23Q86U06 439 aaKnown RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 RTN4RL1Q86UN2 441 aaPredicted RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 SLC35F5Q8WV83 523 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 ABCG8Q9H221 673 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 PCMTD2Q9NV79 361 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 TXNDC16Q9P2K2 825 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 OR12D3Q9UGF7 316 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 ZC3H7BQ9UGR2 993 aaKnown RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 A0A0G2JND7 137 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 LSM8O95777 96 aaKnown RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 PAEPP09466 180 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 ERVK-10P10266 1014 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 ERCC2P18074 760 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 OR1D2P34982 312 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 RDXP35241 583 aaKnown RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 ZNF268Q14587 947 aaPredicted RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 POM121L1PQ3SYA9 428 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 RNF157Q96PX1 679 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 PPP1R10Q96QC0 940 aaKnown RBP10.64□□□□□ -0.71
RFFL-212ENST00000584655 SMIM14Q96QK8 99 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 VPS11Q9H270 941 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 NDFIP2Q9NV92 336 aa10.64□□□□□ -0.71
RFFL-212ENST00000584655 A0A1W2PQH9 124 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 ADAM12O43184 909 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 TTC4O95801 387 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 MT-CO1P00395 513 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 MGAT1P26572 445 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 ANXA13P27216 316 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 ATICP31939 592 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 CHRNA4P43681 627 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 PDE1BQ01064 536 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 AUHQ13825 339 aaKnown RBP10.63□□□□□ -0.71
RFFL-212ENST00000584655 FBXW10Q5XX13 1052 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 NLRP14Q86W24 1093 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 CPT1BQ92523 772 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 CYP3A43Q9HB55 503 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 CAPN7Q9Y6W3 813 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 VPS13AQ96RL7 3174 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 RGPD3A6NKT7 1758 aaPredicted RBP10.63□□□□□ -0.71
RFFL-212ENST00000584655 RGPD4Q7Z3J3 1758 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 RLFQ13129 1914 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 LTFP02788 710 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 USP46P62068 366 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 MPP2Q14168 576 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 PAQR9Q6ZVX9 377 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 EXOC3L1Q86VI1 746 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 OR52K1Q8NGK4 314 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 CAVIN3Q969G5 261 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 CSPG4P5Q96PW8 444 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 SMG9Q9H0W8 520 aaKnown RBP10.63□□□□□ -0.71
RFFL-212ENST00000584655 NRDE2Q9H7Z3 1164 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 ABCF3Q9NUQ8 709 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 SBF1O95248 1867 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 RNF103O00237 685 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 PTPRRQ15256 657 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 THEM5Q8N1Q8 247 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 HIPK3Q9H422 1215 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 LRRC19Q9H756 370 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 CYP4F11Q9HBI6 524 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 TBC1D13Q9NVG8 400 aa10.63□□□□□ -0.71
RFFL-212ENST00000584655 SLC12A8A0AV02 714 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ITIH2P19823 946 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 SOX11P35716 441 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 SLC5A3P53794 718 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ARL4CP56559 192 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 RAP1GAP2Q684P5 730 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 VPS52Q8N1B4 723 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 COLGALT1Q8NBJ5 622 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 PCSK9Q8NBP7 692 aaKnown RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 FAM111AQ96PZ2 611 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 TRABDQ9H4I3 376 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ZDHHC4Q9NPG8 344 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 PCYOX1Q9UHG3 505 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 BRCA1P38398 1863 aaKnown RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 MBLAC1A4D2B0 266 aaPredicted RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 ODC1P11926 461 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 HOXD10P28358 340 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 FNTAP49354 379 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms