RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CC2D1AQ6P1N0 951 aaPredicted RBP19.05■□□□□ 0.64
RFFL-211ENST00000584541 SCYL2Q6P3W7 929 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 OTOP3Q7RTS5 596 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 BNIPLQ7Z465 357 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 UNC45BQ8IWX7 931 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 TRIM58Q8NG06 486 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 KLF16Q9BXK1 252 aaPredicted RBP19.05■□□□□ 0.64
RFFL-211ENST00000584541 WDCPQ9H6R7 721 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 KIF9Q9HAQ2 790 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 PIGVQ9NUD9 493 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 TDP1Q9NUW8 608 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 SMPD4Q9NXE4 827 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 SLC12A6Q9UHW9 1150 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 ARHGAP26Q9UNA1 814 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 CAPN6Q9Y6Q1 641 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 GRID2IPA4D2P6 1211 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 PRPSAP2O60256 369 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 LRCH4O75427 683 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 HARS2P49590 506 aaKnown RBP19.04■□□□□ 0.64
RFFL-211ENST00000584541 CXCR3P49682 368 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 HDAC4P56524 1084 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 MTA1Q13330 715 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 PPP2R5DQ14738 602 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 ARID3BQ8IVW6 561 aaPredicted RBP19.04■□□□□ 0.64
RFFL-211ENST00000584541 ACSF2Q96CM8 615 aaPredicted RBP19.04■□□□□ 0.64
RFFL-211ENST00000584541 ZSWIM3Q96MP5 696 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 LSM7Q9UK45 103 aaKnown RBP19.04■□□□□ 0.64
RFFL-211ENST00000584541 SH3BP1Q9Y3L3 701 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 ALG6Q9Y672 507 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 DOCK8Q8NF50 2099 aa19.04■□□□□ 0.64
RFFL-211ENST00000584541 IRF1P10914 325 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 COMTP21964 271 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 MIPP30301 263 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 AIF1P55008 147 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 EIF4EBP2Q13542 120 aaPredicted RBP19.03■□□□□ 0.64
RFFL-211ENST00000584541 PEX26Q7Z412 305 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 ZSCAN30Q86W11 494 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 FAM131BQ86XD5 332 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 CELF5Q8N6W0 485 aaKnown RBP19.03■□□□□ 0.64
RFFL-211ENST00000584541 ATP6V0D2Q8N8Y2 350 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 LRRC57Q8N9N7 239 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 UBE2Q2Q8WVN8 375 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 SMARCD2Q92925 531 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 SLC39A13Q96H72 371 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 FCRL2Q96LA5 508 aaPredicted RBP19.03■□□□□ 0.64
RFFL-211ENST00000584541 ASB16Q96NS5 453 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 ADAM33Q9BZ11 813 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 DCLK3Q9C098 648 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 GKN1Q9NS71 199 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.03■□□□□ 0.64
RFFL-211ENST00000584541 CALCOCO1Q9P1Z2 691 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 AMFRQ9UKV5 643 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 USP18Q9UMW8 372 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 BRWD1Q9NSI6 2320 aa19.03■□□□□ 0.64
RFFL-211ENST00000584541 LEFTY2O00292 366 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 STC2O76061 302 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 IGLV3-27P01718 113 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 LAMP2P13473 410 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 ATXN1P54253 815 aaKnown RBP19.02■□□□□ 0.64
RFFL-211ENST00000584541 ZC3H12AQ5D1E8 599 aaKnown RBP19.02■□□□□ 0.64
RFFL-211ENST00000584541 FAM78AQ5JUQ0 283 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 SLFN11Q7Z7L1 901 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 C17orf53Q8N3J3 647 aaPredicted RBP19.02■□□□□ 0.64
RFFL-211ENST00000584541 TTC16Q8NEE8 873 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 SH3RF2Q8TEC5 729 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 USP13Q92995 863 aaPredicted RBP19.02■□□□□ 0.64
RFFL-211ENST00000584541 E2F7Q96AV8 911 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 ZFRQ96KR1 1074 aaKnown RBP19.02■□□□□ 0.64
RFFL-211ENST00000584541 MYADMQ96S97 322 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 TKTL2Q9H0I9 626 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 SMG9Q9H0W8 520 aaKnown RBP19.02■□□□□ 0.64
RFFL-211ENST00000584541 GOLPH3Q9H4A6 298 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 CFAP97Q9P2B7 532 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 PCSK1NQ9UHG2 260 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 NR2E1Q9Y466 385 aa19.02■□□□□ 0.64
RFFL-211ENST00000584541 REV3LO60673 3130 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 PRAMEF12O95522 483 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 KRT7P08729 469 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 TCF3P15923 654 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 KCNQ1P51787 676 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 AAK1Q2M2I8 961 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 RAB6CQ53S08 254 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 BOLA3Q53S33 107 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 ZNF569Q5MCW4 686 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 ZFYVE27Q5T4F4 411 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 DAB2IPQ5VWQ8 1189 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 PTCRAQ6ISU1 281 aaPredicted RBP19.01■□□□□ 0.63
RFFL-211ENST00000584541 RHOT1Q8IXI2 618 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 ARFGAP1Q8N6T3 406 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 TDRD5Q8NAT2 981 aaKnown RBP19.01■□□□□ 0.63
RFFL-211ENST00000584541 NTAN1Q96AB6 310 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 BTN2A3PQ96KV6 586 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 PHF7Q9BWX1 381 aaPredicted RBP19.01■□□□□ 0.63
RFFL-211ENST00000584541 IRX2Q9BZI1 471 aaPredicted RBP19.01■□□□□ 0.63
RFFL-211ENST00000584541 RAB6CQ9H0N0 254 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 TRPV4Q9HBA0 871 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 ZFP14Q9HCL3 533 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 ARHGEF38Q9NXL2 777 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 ZNF510Q9Y2H8 683 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms