RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SAAL1Q96ER3 474 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 CDK5RAP1Q96SZ6 601 aaKnown RBP11.72□□□□□ -0.53
CASC3-208ENST00000583649 SLC2A11Q9BYW1 496 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 ZNF518BQ9C0D4 1074 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 AASDHPPTQ9NRN7 309 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 FBXO10Q9UK96 956 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 KIF3AQ9Y496 699 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 KNTC1P50748 2209 aa11.72□□□□□ -0.53
CASC3-208ENST00000583649 PTPRQQ9UMZ3 2332 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 COL6A6A6NMZ7 2263 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 MYOFQ9NZM1 2061 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 HECTD1Q9ULT8 2610 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 ZNF233A6NK53 670 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.53
CASC3-208ENST00000583649 RNASEH1O60930 286 aaKnown RBP11.71□□□□□ -0.53
CASC3-208ENST00000583649 CLSTN1O94985 981 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 ZDHHC11BP0C7U3 371 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 CAMK2GQ13555 558 aaPredicted RBP11.71□□□□□ -0.53
CASC3-208ENST00000583649 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.53
CASC3-208ENST00000583649 COLEC12Q5KU26 742 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 C6orf132Q5T0Z8 1188 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 KIAA0895LQ68EN5 471 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 KLHDC10Q6PID8 442 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 KDM7AQ6ZMT4 941 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 SKAP1Q86WV1 359 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 GPD1LQ8N335 351 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 SCAMP5Q8TAC9 235 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 TTC9Q92623 222 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 HIC2Q96JB3 615 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 DEPDC7Q96QD5 511 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 KLF16Q9BXK1 252 aaPredicted RBP11.71□□□□□ -0.53
CASC3-208ENST00000583649 SEMA4CQ9C0C4 833 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 KIAA1586Q9HCI6 787 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.53
CASC3-208ENST00000583649 PLK2Q9NYY3 685 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 SIX4Q9UIU6 781 aa11.71□□□□□ -0.53
CASC3-208ENST00000583649 A0A1W2PPC4 97 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 LRRC72A6NJI9 287 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 DXOO77932 396 aaKnown RBP11.7□□□□□ -0.54
CASC3-208ENST00000583649 GCNT3O95395 438 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 MT-CO3P00414 261 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 GAP43P17677 238 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 ACP1P24666 158 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 CD38P28907 300 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 RBMS1P29558 406 aaKnown RBP11.7□□□□□ -0.54
CASC3-208ENST00000583649 PSEN1P49768 467 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 TOB1P50616 345 aaPredicted RBP11.7□□□□□ -0.54
CASC3-208ENST00000583649 CLDN6P56747 220 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 GABREP78334 506 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 ASIC1P78348 528 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 COG7P83436 770 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 DAB2P98082 770 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 INSM1Q01101 510 aaPredicted RBP11.7□□□□□ -0.54
CASC3-208ENST00000583649 NFATC3Q12968 1075 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 TRPC3Q13507 836 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 GEN1Q17RS7 908 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 WDR72Q3MJ13 1102 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 L1TD1Q5T7N2 865 aaKnown RBP11.7□□□□□ -0.54
CASC3-208ENST00000583649 LAYNQ6UX15 382 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 CCDC81Q6ZN84 652 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 STXBP4Q6ZWJ1 553 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 WDR49Q8IV35 697 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 CXorf38Q8TB03 319 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 LARP4BQ92615 738 aaKnown RBP11.7□□□□□ -0.54
CASC3-208ENST00000583649 RAD54LQ92698 747 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 ARHGAP9Q9BRR9 750 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 B3GNT5Q9BYG0 378 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 DNAI2Q9GZS0 605 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 ERVMER34-1Q9H9K5 563 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 IL37Q9NZH6 218 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 SUN2Q9UH99 717 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
CASC3-208ENST00000583649 FAM92AA1XBS5 289 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 FAM47DPA6NHR8 397 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 CBX4O00257 560 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 CLDN5O00501 218 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 PENKP01210 267 aaPredicted RBP11.69□□□□□ -0.54
CASC3-208ENST00000583649 ATP5BP06576 529 aaKnown RBP11.69□□□□□ -0.54
CASC3-208ENST00000583649 RALAP11233 206 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 PRKCHP24723 683 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 EPHA8P29322 1005 aaPredicted RBP11.69□□□□□ -0.54
CASC3-208ENST00000583649 DDIT3P35638 169 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 LSSP48449 732 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 NEK4P51957 841 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 PDE4CQ08493 712 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 MCM6Q14566 821 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 C10orf120Q5SQS8 335 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 USP30Q70CQ3 517 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 DDI1Q8WTU0 396 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 HPS3Q969F9 1004 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 FIZ1Q96SL8 496 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 KCNK16Q96T55 309 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 MRPL45Q9BRJ2 306 aaKnown RBP11.69□□□□□ -0.54
CASC3-208ENST00000583649 ABCG4Q9H172 646 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 POLR1BQ9H9Y6 1135 aa11.69□□□□□ -0.54
CASC3-208ENST00000583649 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms