RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 DNAJC17Q9NVM6 304 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-227ENST00000583352 DMAC2Q9NW81 257 aa10.22□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CALCOCO1Q9P1Z2 691 aa10.22□□□□□ -0.77
CDK5RAP3-227ENST00000583352 WDR35Q9P2L0 1181 aa10.22□□□□□ -0.77
CDK5RAP3-227ENST00000583352 LSM7Q9UK45 103 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-227ENST00000583352 STARD13Q9Y3M8 1113 aa10.22□□□□□ -0.77
CDK5RAP3-227ENST00000583352 UPK3BL1B0FP48 263 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 UPK3BL2E5RIL1 263 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 NEDD8-MDP1E9PL57 170 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TRIM24O15164 1050 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CETN3O15182 167 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CACNG3O60359 315 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 STX10O60499 249 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 OPHN1O60890 802 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 BEST1O76090 585 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 VNN1O95497 513 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SERPINF2P08697 491 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CCDC130P13994 396 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 RDXP35241 583 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ATP5C1P36542 298 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 NDST1P52848 882 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MAP3K7CLP57077 242 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CLDN10P78369 228 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SIM1P81133 766 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SEMA3BQ13214 749 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ORC1Q13415 861 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MAN2A1Q16706 1144 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SGSM1Q2NKQ1 1148 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 EGFLAMQ63HQ2 1017 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 E4F1Q66K89 784 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TPGS1Q6ZTW0 290 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 PIP4P1Q86T03 277 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 UNC93AQ86WB7 457 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CHPFQ8IZ52 775 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CCAR2Q8N163 923 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CRYBG2Q8N1P7 616 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 IPO4Q8TEX9 1081 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TAF4BQ92750 862 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 GATA6Q92908 595 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ELMO3Q96BJ8 720 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KLF16Q9BXK1 252 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CSNK1G1Q9HCP0 422 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.772e-6■■■■□ 21
CDK5RAP3-227ENST00000583352 FAM49BQ9NUQ9 324 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MARK1Q9P0L2 795 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 HCN2Q9UL51 889 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CYP8B1Q9UNU6 501 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 NEUROG3Q9Y4Z2 214 aa10.21□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MYO18AQ92614 2054 aaKnown RBP10.21□□□□□ -0.78
CDK5RAP3-227ENST00000583352 IGHV1OR15-9A0A0B4J2B8 117 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 SPAARA0A1B0GVQ0 90 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 HYAL3O43820 417 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 CALUO43852 315 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 GREM1O60565 184 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 NDUFS2O75306 463 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 TBX18O95935 607 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 GYPCP04921 128 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 TPM2P07951 284 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 SYPP08247 313 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 FAM200BP0CF97 657 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 PRKCSHP14314 528 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 TYRP14679 529 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 NDUFV2P19404 249 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 ADORA2BP29275 332 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 CASP14P31944 242 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 DGKGP49619 791 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 PGFP49763 221 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 TRIM14Q14142 442 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 ZACNQ401N2 412 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 MIB1Q86YT6 1006 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 SLC9A9Q8IVB4 645 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 TRIM59Q8IWR1 403 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 ASCC3Q8N3C0 2202 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 MINDY1Q8N5J2 469 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 TMC2Q8TDI7 906 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 CEP192Q8TEP8 1941 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 TMEM174Q8WUU8 243 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 CPLX3Q8WVH0 158 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 ZCCHC14Q8WYQ9 949 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 JAKMIP2Q96AA8 810 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 ACOX2Q99424 681 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 GABRG3Q99928 467 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 BAG1Q99933 345 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 NUP58Q9BVL2 599 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 TTYH3Q9C0H2 523 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 NDST4Q9H3R1 872 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 CAPN10Q9HC96 672 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 CYLDQ9NQC7 956 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 FSCN3Q9NQT6 498 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 RALYQ9UKM9 306 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 CAPN11Q9UMQ6 739 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 SCML2Q9UQR0 700 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 SIK3Q9Y2K2 1263 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 FRYLO94915 3013 aa10.2□□□□□ -0.78
CDK5RAP3-227ENST00000583352 MYH10P35580 1976 aa10.19□□□□□ -0.78
CDK5RAP3-227ENST00000583352 WDR87Q6ZQQ6 2873 aa10.19□□□□□ -0.78
CDK5RAP3-227ENST00000583352 USP27XA6NNY8 438 aa10.19□□□□□ -0.78
CDK5RAP3-227ENST00000583352 H0Y626 953 aa10.19□□□□□ -0.78
CDK5RAP3-227ENST00000583352 GFRA2O00451 464 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms