RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TRAPPC9Q96Q05 1148 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 ISCA1Q9BUE6 129 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 VPS16Q9H269 839 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 TAF1DQ9H5J8 278 aaPredicted RBP6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 CCDC134Q9H6E4 229 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 ADAM21Q9UKJ8 722 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 CNTN6Q9UQ52 1028 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 DMRT1Q9Y5R6 373 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 CCDC187A0A096LP49 1063 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 GALNSP34059 522 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 THBS4P35443 961 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 GPC5P78333 572 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 TMEM95Q3KNT9 176 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 NFRKBQ6P4R8 1299 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 RAB11FIP2Q7L804 512 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 MOGAT3Q86VF5 341 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 SMAP1Q8IYB5 467 aaPredicted RBP6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 C12orf76Q8N812 135 aaPredicted RBP6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 RILPL2Q969X0 211 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 UROC1Q96N76 676 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 CINPQ9BW66 212 aaPredicted RBP6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 IKZF4Q9H2S9 585 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 SEPSECSQ9HD40 501 aaKnown RBP6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 TFCP2L1Q9NZI6 479 aa6.39□□□□□ -1.39
SMARCE1-219ENST00000583294 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 APEHP13798 732 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 MMP8P22894 467 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 IGHMBP2P38935 993 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 RAE1P78406 368 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 RNASELQ05823 741 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 SF3A3Q12874 501 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 PPFIA1Q13136 1202 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 CUL4BQ13620 913 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 ZNF569Q5MCW4 686 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 ZNF362Q5T0B9 420 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 CEP85Q6P2H3 762 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 C16orf89Q6UX73 402 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 BCDIN3DQ7Z5W3 292 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 MAFAQ8NHW3 353 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 PPM1EQ8WY54 764 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 DAZAP1Q96EP5 407 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 EDC3Q96F86 508 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 REXO5Q96IC2 774 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 HS6ST2Q96MM7 605 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 BBC3Q96PG8 261 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 SYNPO2LQ9H987 977 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 SAYSD1Q9NPB0 183 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 KIF17Q9P2E2 1029 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 RAB21Q9UL25 225 aa6.38□□□□□ -1.39
SMARCE1-219ENST00000583294 H0Y3Z8 333 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 FYB1O15117 783 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 IRAK2O43187 625 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 KRT38O76015 456 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 GPD1P21695 349 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 CST5P28325 142 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 ARL4CP56559 192 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 HOXA4Q00056 320 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 TRIM60Q495X7 471 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 C4orf46Q504U0 113 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 ACSM6Q6P461 480 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 PCSK4Q6UW60 755 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 SERPINA13PQ6UXR4 307 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 TRIM72Q6ZMU5 477 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 RFX8Q6ZV50 586 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 NPIPB3Q92617 1050 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 SNX18Q96RF0 628 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 AGAP2Q99490 1192 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 TIMP4Q99727 224 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 PAAF1Q9BRP4 392 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 DDX23Q9BUQ8 820 aaKnown RBP6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 ASIC5Q9NY37 505 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 C11orf21Q9P2W6 132 aa6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 C19orf53Q9UNZ5 99 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-219ENST00000583294 WDR33Q9C0J8 1336 aaKnown RBP6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 LOC105369274A0A096LPK9 316 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 LOC102723532A0A0G2JNH3 316 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 GXYLT2A0PJZ3 443 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 EFCAB8A8MWE9 144 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 B9A039 149 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 SMIM22K7EJ46 135 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 NPHP1O15259 732 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 JTBO76095 146 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 C1RP00736 705 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 MBPP02686 304 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 ADD2P35612 726 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 JAK3P52333 1124 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 CFHR3Q02985 330 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 FAM187BQ17R55 369 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 AAK1Q2M2I8 961 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 ANKRD45Q5TZF3 282 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 FTSJ3Q8IY81 847 aaKnown RBP6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 OR4N4Q8N0Y3 316 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 AFG1LQ8WV93 481 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 GOLGA1Q92805 767 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 REPS1Q96D71 796 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 ABHD10Q9NUJ1 306 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 ZNHIT2Q9UHR6 403 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 KCND3Q9UK17 655 aa6.36□□□□□ -1.39
SMARCE1-219ENST00000583294 TRPC5Q9UL62 973 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms