RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 HOXA7P31268 230 aaPredicted RBP4.72□□□□□ -1.65
COPS3-217ENST00000583160 MTA1Q13330 715 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 GAB1Q13480 694 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 TMEM196Q5HYL7 178 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 FAM90A2PQ658T7 463 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 MRNIPQ6NTE8 343 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 RBM44Q6ZP01 1051 aaKnown RBP4.72□□□□□ -1.65
COPS3-217ENST00000583160 KIAA0408Q6ZU52 694 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 BEND5Q7L4P6 421 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 ZDHHC17Q8IUH5 632 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 BCAS4Q8TDM0 211 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 METTL14Q9HCE5 456 aaKnown RBP4.72□□□□□ -1.65
COPS3-217ENST00000583160 TMEM45AQ9NWC5 275 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 MYO1AQ9UBC5 1043 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 ZMYND8Q9ULU4 1186 aaPredicted RBP4.72□□□□□ -1.65
COPS3-217ENST00000583160 FAM50BQ9Y247 325 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 SQORQ9Y6N5 450 aa4.72□□□□□ -1.65
COPS3-217ENST00000583160 SLC22A23A1A5C7 686 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 FAM90A10PA6NDY2 464 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 ZSCAN9O15535 394 aaPredicted RBP4.71□□□□□ -1.66
COPS3-217ENST00000583160 ST6GAL1P15907 406 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 TSHRP16473 764 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 RPS6KB1P23443 525 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 MST1P26927 711 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 SLC5A2P31639 672 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 HOXD12P35452 270 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 IDUAP35475 653 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 IGHMBP2P38935 993 aaKnown RBP4.71□□□□□ -1.66
COPS3-217ENST00000583160 STT3AP46977 705 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 RAPGEF1Q13905 1077 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.71□□□□□ -1.66
COPS3-217ENST00000583160 RAP1GAP2Q684P5 730 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 TLDC1Q6P9B6 456 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 USP17L6PQ6QN14 398 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 ZNF793Q6ZN11 406 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 FAM57BQ71RH2 274 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 CCDC28AQ8IWP9 274 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 UEVLDQ8IX04 471 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 AKAP1Q92667 903 aaKnown RBP eCLIP4.71□□□□□ -1.66
COPS3-217ENST00000583160 CELF1Q92879 486 aaKnown RBP4.71□□□□□ -1.66
COPS3-217ENST00000583160 SENP7Q9BQF6 1050 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 GATA5Q9BWX5 397 aaPredicted RBP4.71□□□□□ -1.66
COPS3-217ENST00000583160 RNF26Q9BY78 433 aaPredicted RBP4.71□□□□□ -1.66
COPS3-217ENST00000583160 ASNSD1Q9NWL6 643 aa4.71□□□□□ -1.66
COPS3-217ENST00000583160 A0A1W2PPC4 97 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 PRYO14603 147 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 APOL1O14791 398 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 TULP3O75386 442 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 OAZ2O95190 189 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 CRYABP02511 175 aaKnown RBP4.7□□□□□ -1.66
COPS3-217ENST00000583160 SLC3A2P08195 630 aaKnown RBP4.7□□□□□ -1.66
COPS3-217ENST00000583160 SLC5A1P13866 664 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 HOXB6P17509 224 aaKnown RBP4.7□□□□□ -1.66
COPS3-217ENST00000583160 MATN1P21941 496 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 MMP8P22894 467 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 TKTP29401 623 aaKnown RBP4.7□□□□□ -1.66
COPS3-217ENST00000583160 PRIM2P49643 509 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 SLC12A2P55011 1212 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 B4GALNT1Q00973 533 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 SEMA3BQ13214 749 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 COBLL1Q53SF7 1204 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 MMP21Q8N119 569 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 CLASRPQ8N2M8 674 aaKnown RBP4.7□□□□□ -1.66
COPS3-217ENST00000583160 OVCA2Q8WZ82 227 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 SNX27Q96L92 541 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 TBCBQ99426 244 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 COLEC11Q9BWP8 271 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 KRTAP1-5Q9BYS1 174 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 PCDHAC1Q9H158 963 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 RXFP3Q9NSD7 469 aa4.7□□□□□ -1.66
COPS3-217ENST00000583160 TTBK1Q5TCY1 1321 aaPredicted RBP4.7□□□□□ -1.66
COPS3-217ENST00000583160 EVPLQ92817 2033 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 NDST3O95803 873 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 IDEP14735 1019 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 NDUFS1P28331 727 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 GABRB3P28472 473 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 GSTM5P46439 218 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 KRTAP10-9P60411 292 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 ATP1A4Q13733 1029 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 SAFBQ15424 915 aaKnown RBP eCLIP4.69□□□□□ -1.66
COPS3-217ENST00000583160 ELF2Q15723 593 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 CCDC144NLQ6NUI1 221 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 KYAT3Q6YP21 454 aaKnown RBP4.69□□□□□ -1.66
COPS3-217ENST00000583160 ADGRF4Q8IZF3 695 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 GRAMD1AQ96CP6 724 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 TMEM8AQ9HCN3 771 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 SEMA4BQ9NPR2 832 aaPredicted RBP4.69□□□□□ -1.66
COPS3-217ENST00000583160 MAN2B2Q9Y2E5 1009 aa4.69□□□□□ -1.66
COPS3-217ENST00000583160 TRIP12Q14669 1992 aaPredicted RBP4.69□□□□□ -1.66
COPS3-217ENST00000583160 CCDC187A0A096LP49 1063 aa4.68□□□□□ -1.66
COPS3-217ENST00000583160 OR2W5A6NFC9 320 aa4.68□□□□□ -1.66
COPS3-217ENST00000583160 B4DGG1 531 aa4.68□□□□□ -1.66
COPS3-217ENST00000583160 ALADP13716 330 aa4.68□□□□□ -1.66
COPS3-217ENST00000583160 PECAM1P16284 738 aaPredicted RBP4.68□□□□□ -1.66
COPS3-217ENST00000583160 TFEBP19484 476 aa4.68□□□□□ -1.66
COPS3-217ENST00000583160 CCKARP32238 428 aa4.68□□□□□ -1.66
COPS3-217ENST00000583160 IL6STP40189 918 aaPredicted RBP4.68□□□□□ -1.66
COPS3-217ENST00000583160 SOX2P48431 317 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms