RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 NUGGCQ68CJ6 796 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CC2D1AQ6P1N0 951 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PEX26Q7Z412 305 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ZSCAN30Q86W11 494 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CPNE8Q86YQ8 564 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PLCD3Q8N3E9 789 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 TRIM58Q8NG06 486 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SUSD6Q92537 303 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 NT5C3BQ969T7 300 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PLD4Q96BZ4 506 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ZSWIM3Q96MP5 696 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ADAM33Q9BZ11 813 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 RNF38Q9H0F5 515 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 RAB6CQ9H0N0 254 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ZWILCHQ9H900 591 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 KIF9Q9HAQ2 790 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 TMEM51Q9NW97 253 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 GDE1Q9NZC3 331 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CFAP97Q9P2B7 532 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PCSK1NQ9UHG2 260 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 LSM7Q9UK45 103 aaKnown RBP9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ARHGAP26Q9UNA1 814 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 FAM50BQ9Y247 325 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 TLR6Q9Y2C9 796 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SH3BP1Q9Y3L3 701 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 NOTCH4Q99466 2003 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 LAMA3Q16787 3333 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 MBTPS2O43462 519 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 MIPP30301 263 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CORO1AP31146 461 aaKnown RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PCK1P35558 622 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SLC1A1P43005 524 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 HARS2P49590 506 aaKnown RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CXCR3P49682 368 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 DNA2P51530 1060 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 KCNQ1P51787 676 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ATXN1P54253 815 aaKnown RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 RING1Q06587 406 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PPP2R5DQ14738 602 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 LEXMQ3ZCV2 418 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ODF2Q5BJF6 829 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 EFHC2Q5JST6 749 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 FAM78AQ5JUQ0 283 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ZNF569Q5MCW4 686 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 BRMS1LQ5PSV4 323 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PTCRAQ6ISU1 281 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 OTOP3Q7RTS5 596 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ARID3BQ8IVW6 561 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CCDC185Q8N715 623 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 LRRC57Q8N9N7 239 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 TDRD5Q8NAT2 981 aaKnown RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SH3RF2Q8TEC5 729 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CENPIQ92674 756 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SMARCD2Q92925 531 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 USP13Q92995 863 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ACSF2Q96CM8 615 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PGAP3Q96FM1 320 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 FCRL2Q96LA5 508 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 MYADMQ96S97 322 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 IRX2Q9BZI1 471 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 WDCPQ9H6R7 721 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 GKN1Q9NS71 199 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 KCND1Q9NSA2 647 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 TDP1Q9NUW8 608 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CALCOCO1Q9P1Z2 691 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 AMFRQ9UKV5 643 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 USP18Q9UMW8 372 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ALG6Q9Y672 507 aa9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ZFP37Q9Y6Q3 630 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1P2-201ENST00000582923 LAMA2P24043 3122 aaKnown RBP9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 LEFTY2O00292 366 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SCAMP3O14828 347 aaKnown RBP9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 STC2O76061 302 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ENDOD1O94919 500 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 IGLV3-27P01718 113 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 KRT1P04264 644 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 KRT7P08729 469 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 TCF4P15884 667 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SLC11A2P49281 568 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 AIF1P55008 147 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 TAS2R40P59535 323 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 GNG11P61952 73 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SLC25A11Q02978 314 aaKnown RBP9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 USP4Q13107 963 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 MTA1Q13330 715 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SMTNL2Q2TAL5 461 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PUS10Q3MIT2 529 aaKnown RBP9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 BNIPLQ7Z465 357 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SLFN11Q7Z7L1 901 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CHSY1Q86X52 802 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 DENND1CQ8IV53 801 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 UNC45BQ8IWX7 931 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 RHOT1Q8IXI2 618 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SLC35F6Q8N357 371 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ARFGAP1Q8N6T3 406 aa9.44□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CELF5Q8N6W0 485 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms