RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 OXTRP30559 389 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 CHKAP35790 457 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 PSEN1P49768 467 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 TPMTP51580 245 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 KIF11P52732 1056 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 INCA1Q0VD86 236 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 GEN1Q17RS7 908 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 DCAF12L1Q5VU92 463 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 C19orf48Q6RUI8 117 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 SV2AQ7L0J3 742 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 SCD5Q86SK9 330 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 SLCO6A1Q86UG4 719 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 TMC2Q8TDI7 906 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 UCMAQ8WVF2 138 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 CYFIP2Q96F07 1278 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 TWNKQ96RR1 684 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 MIR1-1HGQ9H1L0 117 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 IL21RQ9HBE5 538 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 KIAA1522Q9P206 1035 aaPredicted RBP14.25□□□□□ -0.13
SS18-222ENST00000582792 NAGPAQ9UK23 515 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 SMG1Q96Q15 3661 aaKnown RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 PTPRBP23467 1997 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 A0A1B0GVL5 298 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 METTL12A8MUP2 240 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 IKBKBO14920 756 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 BCAT2O15382 392 aaPredicted RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 SYNCRIPO60506 623 aaKnown RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 CER1O95813 267 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 PIK3CAP42336 1068 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 MATKP42679 507 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 SYKP43405 635 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 AFMP43652 599 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 ZNF234Q14588 700 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 E2F5Q15329 346 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 IL27RAQ6UWB1 636 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 CCDC186Q7Z3E2 898 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 PDZD3Q86UT5 571 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 TMPRSS6Q8IU80 811 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 KIAA0895Q8NCT3 520 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 BAHD1Q8TBE0 780 aaPredicted RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 SETD7Q8WTS6 366 aaKnown RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 PRCCQ92733 491 aaPredicted RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 SIPA1Q96FS4 1042 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 PIWIL1Q96J94 861 aaKnown RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 GBP4Q96PP9 640 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 CDK5RAP1Q96SZ6 601 aaKnown RBP14.24□□□□□ -0.13
SS18-222ENST00000582792 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 DCLK3Q9C098 648 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 GAREM1Q9H706 876 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 TM7SF3Q9NS93 570 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 CLIC5Q9NZA1 410 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 USP3Q9Y6I4 520 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 CKAP5Q14008 2032 aa14.24□□□□□ -0.13
SS18-222ENST00000582792 APC2O95996 2303 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 ACACAQ13085 2346 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 KLRC4O43908 158 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 CILPO75339 1184 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 HLA-DRAP01903 254 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 NR3C1P04150 777 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 MYL1P05976 194 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 RALAP11233 206 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 CORO1AP31146 461 aaKnown RBP14.23□□□□□ -0.13
SS18-222ENST00000582792 NDUFA8P51970 172 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 COPAP53621 1224 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 COG7P83436 770 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 BNC1Q01954 994 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 STK4Q13043 487 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 EIF4HQ15056 248 aaKnown RBP14.23□□□□□ -0.13
SS18-222ENST00000582792 COL28A1Q2UY09 1125 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 C1orf220Q5T0J3 134 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 DBX2Q6ZNG2 339 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 ANKS1BQ7Z6G8 1248 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 CEP57L1Q8IYX8 460 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 RBBP8NLQ8NC74 664 aaPredicted RBP14.23□□□□□ -0.13
SS18-222ENST00000582792 C1orf216Q8TAB5 229 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 MDM1Q8TC05 714 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 CCDC34Q96HJ3 373 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 NUP58Q9BVL2 599 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 KCTD10Q9H3F6 313 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 CYP3A43Q9HB55 503 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 ELOVL2Q9NXB9 296 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 TOR4AQ9NXH8 423 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 RASAL2Q9UJF2 1139 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 AGO1Q9UL18 857 aaKnown RBP14.23□□□□□ -0.13
SS18-222ENST00000582792 FNDC3AQ9Y2H6 1198 aaKnown RBP14.23□□□□□ -0.13
SS18-222ENST00000582792 PCDHGB2Q9Y5G2 931 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 BPTFQ12830 3046 aa14.23□□□□□ -0.13
SS18-222ENST00000582792 PDXKO00764 312 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 FLRT2O43155 660 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 ACTN4O43707 911 aaKnown RBP14.22□□□□□ -0.13
SS18-222ENST00000582792 DKK1O94907 266 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 CYBBP04839 570 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 ACADMP11310 421 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 PRKCHP24723 683 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 UBE2HP62256 183 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 HLA-BQ31612 363 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 SOWAHCQ53LP3 525 aaPredicted RBP14.22□□□□□ -0.13
SS18-222ENST00000582792 TMPRSS7Q7RTY8 843 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 ELOA2Q8IYF1 753 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms