RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 CCR3P51677 355 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 GSCP56915 257 aaPredicted RBP13.17□□□□□ -0.3
SNORD55-201ENST00000581525 ZNF445P59923 1031 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 FANCCQ00597 558 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 MESP2Q0VG99 397 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 TAF5Q15542 800 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 PREPLQ4J6C6 727 aaPredicted RBP13.17□□□□□ -0.3
SNORD55-201ENST00000581525 TRIM72Q6ZMU5 477 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 BNIPLQ7Z465 357 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 XYLT1Q86Y38 959 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 PASD1Q8IV76 773 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 ZBTB44Q8NCP5 570 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 OLIG1Q8TAK6 271 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 GOLGA1Q92805 767 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 C18orf8Q96DM3 657 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 PGAP3Q96FM1 320 aaPredicted RBP13.17□□□□□ -0.3
SNORD55-201ENST00000581525 SERPINB11Q96P15 392 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 AIPL1Q9NZN9 384 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 SLC27A6Q9Y2P4 619 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 USP34Q70CQ2 3546 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 K7ESF4 209 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
SNORD55-201ENST00000581525 HSF2BPO75031 334 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 ATG13O75143 517 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 TULP3O75386 442 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 MMP8P22894 467 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 NOS2P35228 1153 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 PLA2G5P39877 138 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 PRKCIP41743 596 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 KIR2DL1P43626 348 aaPredicted RBP13.16□□□□□ -0.3
SNORD55-201ENST00000581525 CXCL12P48061 93 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
SNORD55-201ENST00000581525 TPM4P67936 248 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 MRPS21P82921 87 aaKnown RBP13.16□□□□□ -0.3
SNORD55-201ENST00000581525 PTP4A2Q12974 167 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 HSF5Q4G112 596 aaPredicted RBP13.16□□□□□ -0.3
SNORD55-201ENST00000581525 MPP7Q5T2T1 576 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 ADGRF1Q5T601 910 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 NUGGCQ68CJ6 796 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 Q6ZS52 159 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 FAM183BPQ6ZVS7 135 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 ERICH1Q86X53 443 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 DENND1CQ8IV53 801 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 TTC16Q8NEE8 873 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 USP33Q8TEY7 942 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 SLC20A1Q8WUM9 679 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 FCRL2Q96LA5 508 aaPredicted RBP13.16□□□□□ -0.3
SNORD55-201ENST00000581525 PCDHB18PQ96TA0 734 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 SLC2A11Q9BYW1 496 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 SPATA6Q9NWH7 488 aaPredicted RBP13.16□□□□□ -0.3
SNORD55-201ENST00000581525 RRN3Q9NYV6 651 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 DEC1Q9P2X7 70 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 TMEM59LQ9UK28 342 aa13.16□□□□□ -0.3
SNORD55-201ENST00000581525 CCDC163A0A0D9SF12 145 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 A0A1W2PQJ5 194 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 IRAK2O43187 625 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 LILRB5O75023 590 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 ENDOD1O94919 500 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 KAT7O95251 611 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.3
SNORD55-201ENST00000581525 SERPINC1P01008 464 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 HMBSP08397 361 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 CCDC172P0C7W6 258 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 TYRP14679 529 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 FERP16591 822 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 TBX4P57082 545 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 CENPCQ03188 943 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 MPPE1Q53F39 396 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 OR6B2Q6IFH4 312 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 TOGARAM2Q6ZUX3 1019 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 SYT13Q7L8C5 426 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 KIAA0907Q7Z7F0 614 aaPredicted RBP13.15□□□□□ -0.3
SNORD55-201ENST00000581525 DEFB106AQ8N104 65 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 IPO4Q8TEX9 1081 aaKnown RBP13.15□□□□□ -0.3
SNORD55-201ENST00000581525 FAM149B1Q96BN6 582 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 IQCDQ96DY2 449 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 XPO6Q96QU8 1125 aaKnown RBP13.15□□□□□ -0.3
SNORD55-201ENST00000581525 NPY6RQ99463 290 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 SEMA4AQ9H3S1 761 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNORD55-201ENST00000581525 HCN2Q9UL51 889 aa13.15□□□□□ -0.3
SNORD55-201ENST00000581525 KCNU1A8MYU2 1149 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 GOLGA6L19H0YKK7 550 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 CAPN9O14815 690 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 MSI1O43347 362 aaKnown RBP13.14□□□□□ -0.31
SNORD55-201ENST00000581525 ACSL4O60488 711 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 RNF40O75150 1001 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 DAB1O75553 588 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 APODP05090 189 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 MATKP42679 507 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 NRLP54845 237 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 UBASH3AP57075 661 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 PITX1P78337 314 aaPredicted RBP13.14□□□□□ -0.31
SNORD55-201ENST00000581525 CDK17Q00537 523 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 SATB1Q01826 763 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 MTA1Q13330 715 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 PPP2R5DQ14738 602 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 CLEC16AQ2KHT3 1053 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 DCAF6Q58WW2 860 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 FAM133BQ5BKY9 247 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms