RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 MYCBPAPQ8TBZ2 947 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 KBTBD7Q8WVZ9 684 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 BHMTQ93088 406 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 WBP2Q969T9 261 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 SIPA1Q96FS4 1042 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 HPDLQ96IR7 371 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 ANKRD36BP1Q96IX9 119 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 ZFRQ96KR1 1074 aaKnown RBP11.34□□□□□ -0.59
TOP3A-210ENST00000580713 FIZ1Q96SL8 496 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 C7orf25Q9BPX7 421 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 NUP58Q9BVL2 599 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 MTMR12Q9C0I1 747 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 BLZF1Q9H2G9 400 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 SNX25Q9H3E2 840 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 TSPY26PQ9H489 355 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 CCSER2Q9H7U1 834 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 USP36Q9P275 1121 aaKnown RBP11.34□□□□□ -0.59
TOP3A-210ENST00000580713 WDR35Q9P2L0 1181 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 SIX4Q9UIU6 781 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 STON1Q9Y6Q2 735 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 HECTD1Q9ULT8 2610 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 GOLGA8IPA6NC78 632 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 GOLGA8JA6NMD2 632 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 PYCARD-AS1I3L0S3 204 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 BIN1O00499 593 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 CACNG3O60359 315 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 SYNCRIPO60506 623 aaKnown RBP11.33□□□□□ -0.6
TOP3A-210ENST00000580713 RTN3O95197 1032 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-210ENST00000580713 WARSP23381 471 aaKnown RBP11.33□□□□□ -0.6
TOP3A-210ENST00000580713 GNL1P36915 607 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-210ENST00000580713 DGKGP49619 791 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 CCT8P50990 548 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 TPMTP51580 245 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 ASIC1P78348 528 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 IL9RQ01113 521 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 KCNC4Q03721 635 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 CCDC173Q0VFZ6 552 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 STX1AQ16623 288 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 CACUL1Q86Y37 369 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 TMPRSS6Q8IU80 811 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 NUP93Q8N1F7 819 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 ZSWIM2Q8NEG5 633 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 SPATA20Q8TB22 786 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 PRCCQ92733 491 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-210ENST00000580713 CCDC47Q96A33 483 aaKnown RBP11.33□□□□□ -0.6
TOP3A-210ENST00000580713 GSDMAQ96QA5 445 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 TRIM9Q9C026 710 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 MKRN2Q9H000 416 aaKnown RBP11.33□□□□□ -0.6
TOP3A-210ENST00000580713 PDE11AQ9HCR9 933 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 MAN1B1Q9UKM7 699 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 EXOC7Q9UPT5 735 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 ANKRD6Q9Y2G4 727 aa11.33□□□□□ -0.6
TOP3A-210ENST00000580713 MYO18BQ8IUG5 2567 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 CLDN5O00501 218 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 LDHAP00338 332 aaKnown RBP11.32□□□□□ -0.6
TOP3A-210ENST00000580713 TNNC2P02585 160 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 RPN1P04843 607 aaKnown RBP11.32□□□□□ -0.6
TOP3A-210ENST00000580713 CACNA2D1P54289 1103 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 TARDBPQ13148 414 aaKnown RBP eCLIP11.32□□□□□ -0.6
TOP3A-210ENST00000580713 CNNM4Q6P4Q7 775 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 DYMQ7RTS9 669 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 ADAT2Q7Z6V5 191 aaKnown RBP11.32□□□□□ -0.6
TOP3A-210ENST00000580713 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 OVCA2Q8WZ82 227 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 IGSF8Q969P0 613 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 ZNF518BQ9C0D4 1074 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 ELOVL4Q9GZR5 314 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.6
TOP3A-210ENST00000580713 ANO10Q9NW15 660 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 RMND1Q9NWS8 449 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 DNMT3LQ9UJW3 386 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 LSM7Q9UK45 103 aaKnown RBP11.32□□□□□ -0.6
TOP3A-210ENST00000580713 SPTA1P02549 2419 aa11.32□□□□□ -0.6
TOP3A-210ENST00000580713 H0Y8X5 98 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 ENC1O14682 589 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 KLRC4O43908 158 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 PRPF6O94906 941 aaKnown RBP11.31□□□□□ -0.6
TOP3A-210ENST00000580713 PTPN1P18031 435 aaKnown RBP11.31□□□□□ -0.6
TOP3A-210ENST00000580713 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.6
TOP3A-210ENST00000580713 MORC3Q14149 939 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 TSR1Q2NL82 804 aaKnown RBP11.31□□□□□ -0.6
TOP3A-210ENST00000580713 C6orf132Q5T0Z8 1188 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 ISM2Q6H9L7 571 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 LAYNQ6UX15 382 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 UNC13DQ70J99 1090 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 HTR3DQ70Z44 454 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 ZNF720Q7Z2F6 126 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 SFR1Q86XK3 245 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 SYCP3Q8IZU3 236 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 C1orf216Q8TAB5 229 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 SCAMP5Q8TAC9 235 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 UCMAQ8WVF2 138 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 FGF11Q92914 225 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 ACCSQ96QU6 501 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 MRPL45Q9BRJ2 306 aaKnown RBP11.31□□□□□ -0.6
TOP3A-210ENST00000580713 ST6GALNAC4Q9H4F1 302 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 PCIF1Q9H4Z3 704 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms