RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 COCHO43405 550 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 NDUFS2O75306 463 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 KRT19P08727 400 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 GNSP15586 552 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 MTIF2P46199 727 aaKnown RBP20.41■□□□□ 0.86
LIMD2-209ENST00000580222 AP3M2P53677 418 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 NOP14P78316 857 aaKnown RBP20.41■□□□□ 0.86
LIMD2-209ENST00000580222 CYP27A1Q02318 531 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 NCAPHQ15003 741 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 SYCP2LQ5T4T6 812 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 DHX40Q8IX18 779 aaKnown RBP20.41■□□□□ 0.86
LIMD2-209ENST00000580222 CHPFQ8IZ52 775 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 OR5B17Q8NGF7 314 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 GABRG3Q99928 467 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 ZDHHC5Q9C0B5 715 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 TM7SF3Q9NS93 570 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 FANCLQ9NW38 375 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 TBC1D14Q9P2M4 693 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 RAI2Q9Y5P3 530 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 SLCO1B1Q9Y6L6 691 aa20.41■□□□□ 0.86
LIMD2-209ENST00000580222 A0A1B0GTW7 788 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 KCNJ18B7U540 433 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 STX10O60499 249 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 TPM4P67936 248 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 BIRC3Q13489 604 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 KCNJ12Q14500 433 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 IQCB1Q15051 598 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 HLA-BQ31612 363 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 ANO4Q32M45 955 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 WDR45BQ5MNZ6 344 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 BTBD8Q5XKL5 378 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 TRIM59Q8IWR1 403 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 RHBDD1Q8TEB9 315 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 CEP192Q8TEP8 1941 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 SPHK2Q9NRA0 654 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 ITGA11Q9UKX5 1188 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 CDH9Q9ULB4 789 aa20.4■□□□□ 0.86
LIMD2-209ENST00000580222 R3HCC1Q9Y3T6 440 aaKnown RBP20.4■□□□□ 0.86
LIMD2-209ENST00000580222 MGAQ8IWI9 3026 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 GOLGA6L19H0YKK7 550 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 ATXN7O15265 892 aaPredicted RBP20.39■□□□□ 0.85
LIMD2-209ENST00000580222 PHACTR2O75167 634 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 EEF1GP26641 437 aaKnown RBP20.39■□□□□ 0.85
LIMD2-209ENST00000580222 PPP3CCP48454 512 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 GCLMP48507 274 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 CLDN10P78369 228 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 RBP5P82980 135 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 IFRD2Q12894 506 aaPredicted RBP20.39■□□□□ 0.85
LIMD2-209ENST00000580222 C1orf220Q5T0J3 134 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 CDKAL1Q5VV42 579 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 KIAA1324Q6UXG2 1013 aaKnown RBP20.39■□□□□ 0.85
LIMD2-209ENST00000580222 LUZP1Q86V48 1076 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 IRF2BP1Q8IU81 584 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 ZNF843Q8N446 348 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 FOXJ1Q92949 421 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 TOE1Q96GM8 510 aaKnown RBP20.39■□□□□ 0.85
LIMD2-209ENST00000580222 C8orf48Q96LL4 319 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 CEP295NLQ96MC4 621 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 MIR1-1HGQ9H1L0 117 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 PRORYQ9H606 182 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 WSB2Q9NYS7 404 aaPredicted RBP20.39■□□□□ 0.85
LIMD2-209ENST00000580222 CHORDC1Q9UHD1 332 aaPredicted RBP20.39■□□□□ 0.85
LIMD2-209ENST00000580222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.39■□□□□ 0.85
LIMD2-209ENST00000580222 HECTD1Q9ULT8 2610 aa20.39■□□□□ 0.85
LIMD2-209ENST00000580222 CLSTN1O94985 981 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 ZNF883P0CG24 379 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 ANXA13P27216 316 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 CD6P30203 668 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 ABCG1P45844 678 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 PGFP49763 221 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 MXI1P50539 228 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 PPP3CAQ08209 521 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 TCP11X2Q5H9J9 407 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 MDH1BQ5I0G3 518 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 TRAPPC11Q7Z392 1133 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 DDX42Q86XP3 938 aaKnown RBP eCLIP20.38■□□□□ 0.85
LIMD2-209ENST00000580222 ANKRD20A12PQ8NF67 263 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 C1orf216Q8TAB5 229 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 MYCBPAPQ8TBZ2 947 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 ZNF516Q92618 1163 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 SLC35C1Q96A29 364 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 P2RY11Q96G91 374 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 GPR174Q9BXC1 333 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 CCSER2Q9H7U1 834 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 TMEM8AQ9HCN3 771 aa20.38■□□□□ 0.85
LIMD2-209ENST00000580222 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.38■□□□□ 0.85
LIMD2-209ENST00000580222 ATMQ13315 3056 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 TK2O00142 265 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 GREM1O60565 184 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 NCAM1P13591 858 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 PRKCSHP14314 528 aaPredicted RBP20.37■□□□□ 0.85
LIMD2-209ENST00000580222 CDK11BP21127 795 aaKnown RBP20.37■□□□□ 0.85
LIMD2-209ENST00000580222 GTF2H1P32780 548 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 MYO1EQ12965 1108 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 SMAD1Q15797 465 aaKnown RBP20.37■□□□□ 0.85
LIMD2-209ENST00000580222 MAN2A1Q16706 1144 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 TDRD10Q5VZ19 366 aaKnown RBP20.37■□□□□ 0.85
LIMD2-209ENST00000580222 GRAMD4Q6IC98 578 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 OTUB2Q96DC9 234 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 MRPL45Q9BRJ2 306 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms