RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 C16orf46Q6P387 395 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 BRICD5Q6PL45 260 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 SYT10Q6XYQ8 523 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TMC6Q7Z403 805 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 CBWD2Q8IUF1 395 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TMEM139Q8IV31 216 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ARID3BQ8IVW6 561 aaPredicted RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 VSTM4Q8IW00 320 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 SYCP3Q8IZU3 236 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 CELF2-AS1Q8N7Q2 184 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 C3orf58Q8NDZ4 430 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 USP33Q8TEY7 942 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 POMGNT1Q8WZA1 660 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 KCNN1Q92952 543 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ATP2A3Q93084 1043 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 THAP11Q96EK4 314 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TMEM176AQ96HP8 235 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ZSWIM3Q96MP5 696 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ACAP3Q96P50 834 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 DEPDC7Q96QD5 511 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 MED15Q96RN5 788 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 DNAJC7Q99615 494 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 FAM83CQ9BQN1 747 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ADPGKQ9BRR6 497 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 FAM213AQ9BRX8 229 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 MSTO1Q9BUK6 570 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 PCED1AQ9H1Q7 454 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 MAGEF1Q9HAY2 307 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 PDE11AQ9HCR9 933 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TOPORSQ9NS56 1045 aaPredicted RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 SEL1LQ9UBV2 794 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TUBGCP4Q9UGJ1 667 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ADAMTS1Q9UHI8 967 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 MBD1Q9UIS9 605 aaPredicted RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 CPSF3Q9UKF6 684 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 AGO2Q9UKV8 859 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 STYXL1Q9Y6J8 313 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 DENND4CQ5VZ89 1909 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ASCC3Q8N3C0 2202 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 PTPRJQ12913 1337 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TTC26A0AVF1 554 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 CLGNO14967 610 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 FANCGO15287 622 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 OGTO15294 1046 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ADAM12O43184 909 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 PAPSS1O43252 624 aaPredicted RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 STX10O60499 249 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 SMC2O95347 1197 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 NFICP08651 508 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 BCKDHBP21953 392 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 CCR2P41597 374 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 BRCC3P46736 316 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 INHBCP55103 352 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 UBASH3AP57075 661 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 DLG4P78352 724 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 MORC3Q14149 939 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 KCNB1Q14721 858 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 VEPH1Q14D04 833 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 KNOP1Q1ED39 458 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 CT47A1Q5JQC4 288 aaPredicted RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 JADE1Q6IE81 842 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 PKN3Q6P5Z2 889 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ZPBP2Q6X784 338 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 DBX2Q6ZNG2 339 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TMC8Q8IU68 726 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 EFCAB13Q8IY85 973 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 C2orf15Q8WU43 125 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 ZNF516Q92618 1163 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 SMARCE1Q969G3 411 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 PPP1R10Q96QC0 940 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 USB1Q9BQ65 265 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 PYM1Q9BRP8 204 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 LRRC3Q9BY71 257 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TMEM206Q9H813 350 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 AGPAT3Q9NRZ7 376 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 GTSE1Q9NYZ3 720 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 HSPBP1Q9NZL4 362 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 INTUQ9ULD6 942 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 YIPF1Q9Y548 306 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 F5P12259 2224 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 MYO18BQ8IUG5 2567 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 A0A1B0GTW7 788 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 GOLGA6L9A6NEM1 432 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 DCLK1O15075 740 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 EIF3DO15371 548 aaKnown RBP eCLIP3.59□□□□□ -1.83
CDH19-204ENST00000579658 ZSCAN12O43309 604 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 TADA3O75528 432 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 NFATC1O95644 943 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ATP1A3P13637 1013 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ZNF18P17022 549 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 GNALP38405 381 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 CLCNKBP51801 687 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ILKQ13418 452 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ZBTB6Q15916 424 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 CRY1Q16526 586 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 C21orf62-AS1Q17RA5 79 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 BMT2Q1RMZ1 405 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ZCWPW2Q504Y3 356 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 XKR4Q5GH76 650 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms