RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 RASSF3Q86WH2 238 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 CCDC33Q8N5R6 958 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 ALLCQ8N6M5 410 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 ZNF513Q8N8E2 541 aaPredicted RBP15.48■□□□□ 0.07
SS18-212ENST00000579061 TXNDC5Q8NBS9 432 aaKnown RBP15.48■□□□□ 0.07
SS18-212ENST00000579061 AZIN2Q96A70 460 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 FAM149B1Q96BN6 582 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 NOX5Q96PH1 765 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 HINFPQ9BQA5 517 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 NAA15Q9BXJ9 866 aaKnown RBP15.48■□□□□ 0.07
SS18-212ENST00000579061 SLC2A11Q9BYW1 496 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 POLR3BQ9NW08 1133 aaPredicted RBP15.48■□□□□ 0.07
SS18-212ENST00000579061 FANCLQ9NW38 375 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 TAB2Q9NYJ8 693 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 GMEB2Q9UKD1 530 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 DAAM1Q9Y4D1 1078 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 FHOD1Q9Y613 1164 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 ANTXRLA6NF34 631 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 E5RJQ4 531 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 GFRA2O00451 464 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 TRIM24O15164 1050 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 RPP40O75818 363 aaKnown RBP15.47■□□□□ 0.07
SS18-212ENST00000579061 ALDH1A2O94788 518 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 FYNP06241 537 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 GLI1P08151 1106 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 NCAM1P13591 858 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 UCHL3P15374 230 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 KRT9P35527 623 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 PXNP49023 591 aaPredicted RBP15.47■□□□□ 0.07
SS18-212ENST00000579061 SNX16P57768 344 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 SRSF5Q13243 272 aaKnown RBP15.47■□□□□ 0.07
SS18-212ENST00000579061 MPPE1Q53F39 396 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 ADGRF1Q5T601 910 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 CEP68Q76N32 757 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 WDTC1Q8N5D0 677 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 ANKRD20A12PQ8NF67 263 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 SERPINB11Q96P15 392 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 LSM14BQ9BX40 385 aaKnown RBP15.47■□□□□ 0.07
SS18-212ENST00000579061 STK33Q9BYT3 514 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 VPS16Q9H269 839 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 POPDC2Q9HBU9 364 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 POLMQ9NP87 494 aaPredicted RBP15.47■□□□□ 0.07
SS18-212ENST00000579061 ASNSD1Q9NWL6 643 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 PLK2Q9NYY3 685 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 TMEM63CQ9P1W3 806 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 CEP83Q9Y592 693 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 PLXND1Q9Y4D7 1925 aa15.47■□□□□ 0.07
SS18-212ENST00000579061 SDK1Q7Z5N4 2213 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 LRRC10BA6NIK2 292 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 SGK1O00141 431 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 MSI1O43347 362 aaKnown RBP15.46■□□□□ 0.07
SS18-212ENST00000579061 LRP3O75074 770 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 ADAM23O75077 832 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 RETP07949 1114 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 NTSR1P30989 418 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 TBX4P57082 545 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 YWHAZP63104 245 aaKnown RBP15.46■□□□□ 0.07
SS18-212ENST00000579061 RAPGEF1Q13905 1077 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 E2F5Q15329 346 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 FKBP15Q5T1M5 1219 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 TMEM92Q6UXU6 159 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 CACNA2D4Q7Z3S7 1137 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 C11orf74Q86VG3 221 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 SLC47A2Q86VL8 602 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 DCLK2Q8N568 766 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 DQX1Q8TE96 717 aaKnown RBP15.46■□□□□ 0.07
SS18-212ENST00000579061 BHMTQ93088 406 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 P2RY11Q96G91 374 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 LOXL4Q96JB6 756 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 PPP1R13BQ96KQ4 1090 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 CPXM1Q96SM3 734 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 LIMA1Q9UHB6 759 aaKnown RBP15.46■□□□□ 0.07
SS18-212ENST00000579061 TLR6Q9Y2C9 796 aa15.46■□□□□ 0.07
SS18-212ENST00000579061 PRRT4C9JH25 899 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 CAPN9O14815 690 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 NPC1O15118 1278 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 IRAK2O43187 625 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 ACSL4O60488 711 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 HNRNPLP14866 589 aaKnown RBP eCLIP15.45■□□□□ 0.061e-9■■■■■ 30.1
SS18-212ENST00000579061 CDH5P33151 784 aaPredicted RBP15.45■□□□□ 0.06
SS18-212ENST00000579061 SLC11A2P49281 568 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 COPB1P53618 953 aaKnown RBP15.45■□□□□ 0.06
SS18-212ENST00000579061 TYRO3Q06418 890 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 EFHC1Q5JVL4 640 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 MPP7Q5T2T1 576 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 TOGARAM2Q6ZUX3 1019 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.45■□□□□ 0.06
SS18-212ENST00000579061 DDI1Q8WTU0 396 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 SLC39A13Q96H72 371 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 PIWIL1Q96J94 861 aaKnown RBP15.45■□□□□ 0.06
SS18-212ENST00000579061 ZC3H10Q96K80 434 aaKnown RBP15.45■□□□□ 0.06
SS18-212ENST00000579061 DDX50Q9BQ39 737 aaKnown RBP15.45■□□□□ 0.06
SS18-212ENST00000579061 NAT10Q9H0A0 1025 aaKnown RBP15.45■□□□□ 0.06
SS18-212ENST00000579061 GANQ9H2C0 597 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 HCN2Q9UL51 889 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 NAALADL1Q9UQQ1 740 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 SPTBN4Q9H254 2564 aa15.45■□□□□ 0.06
SS18-212ENST00000579061 F8VZ95 297 aa15.44■□□□□ 0.06
SS18-212ENST00000579061 PNMA6AP0CW24 399 aaPredicted RBP15.44■□□□□ 0.06
SS18-212ENST00000579061 CYP11B1P15538 503 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms