RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 KIAA1958Q8N8K9 716 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ATP6V0D2Q8N8Y2 350 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NXPE3Q969Y0 559 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ARHGEF26Q96DR7 871 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CFAP57Q96MR6 1250 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ZNF830Q96NB3 372 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ASB16Q96NS5 453 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NPY6RQ99463 290 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 KCNF1Q9H3M0 494 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ZFP14Q9HCL3 533 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 THG1LQ9NWX6 298 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 COX16Q9P0S2 106 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 EPS15L1Q9UBC2 864 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PRKAG3Q9UGI9 489 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SFMBT1Q9UHJ3 866 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CDH22Q9UJ99 828 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NUDT5Q9UKK9 219 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PPP2R2CQ9Y2T4 447 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MIA3Q5JRA6 1907 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 DOCK4Q8N1I0 1966 aa11.74□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SLC9A3R1O14745 358 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 IRAK2O43187 625 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 GJB6O95452 261 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TBX18O95935 607 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TCF3P15923 654 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MAN1A1P33908 653 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 AIF1P55008 147 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 HADHBP55084 474 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ATP11AP98196 1134 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PPP2R5DQ14738 602 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CCDC14Q49A88 953 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 FAM78AQ5JUQ0 283 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 BRMS1LQ5PSV4 323 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TICRRQ7Z2Z1 1910 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ZDHHC14Q8IZN3 488 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SYCE1Q8N0S2 351 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TTC16Q8NEE8 873 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 FAM172AQ8WUF8 416 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 DEPDC1BQ8WUY9 529 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 UBE2Q2Q8WVN8 375 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NT5C3BQ969T7 300 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ELSPBP1Q96BH3 223 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ALS2CR12Q96Q35 445 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MYADMQ96S97 322 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CYP2S1Q96SQ9 504 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TBCBQ99426 244 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 DDX50Q9BQ39 737 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 RNF38Q9H0F5 515 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 WDCPQ9H6R7 721 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TRPV4Q9HBA0 871 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CD320Q9NPF0 282 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 KCND1Q9NSA2 647 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SMPD4Q9NXE4 827 aa11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 REXO2Q9Y3B8 237 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MYOFQ9NZM1 2061 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 E2F8A0AVK6 867 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 LEFTY2O00292 366 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MDM4O15151 490 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PRPSAP2O60256 369 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ECI2O75521 394 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PROSCO94903 275 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ENDOD1O94919 500 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 LATS1O95835 1130 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 IGLV3-25P01717 112 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 HMBSP08397 361 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 IRF1P10914 325 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 IL9P15248 144 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MSNP26038 577 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SLC1A1P43005 524 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SLC11A2P49281 568 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PGFP49763 221 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NHLH1Q02575 133 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 USP4Q13107 963 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MESDQ14696 234 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NIPA2Q8N8Q9 360 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ADAM32Q8TC27 787 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 BPIFB1Q8TDL5 484 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SH3RF2Q8TEC5 729 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CENPIQ92674 756 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 USP13Q92995 863 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 AZIN2Q96A70 460 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 RPGRIP1Q96KN7 1286 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 KLF16Q9BXK1 252 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 OSGEPQ9NPF4 335 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CFAP97Q9P2B7 532 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 IGSF9Q9P2J2 1179 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TBC1D14Q9P2M4 693 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 C5orf42Q9H799 3197 aa11.72□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MACROD2A1Z1Q3 448 aa11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TYW5A2RUC4 315 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TMEM110-MUSTN1A8MSY1 372 aa11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 C2CD4DB7Z1M9 353 aa11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MSI1O43347 362 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 BUB1O43683 1085 aa11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SPOPO43791 374 aa11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PSMC3P17980 439 aa11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CORO1AP31146 461 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PCK1P35558 622 aa11.71□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SSR1P43307 286 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms