RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 PMF1Q6P1K2 205 aa16.61■□□□□ 0.25
CRLF3-203ENST00000578692 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
CRLF3-203ENST00000578692 EDEM1Q92611 657 aa16.61■□□□□ 0.25
CRLF3-203ENST00000578692 PIGKQ92643 395 aa16.61■□□□□ 0.25
CRLF3-203ENST00000578692 GABRG3Q99928 467 aa16.61■□□□□ 0.25
CRLF3-203ENST00000578692 ZSWIM1Q9BR11 485 aa16.61■□□□□ 0.25
CRLF3-203ENST00000578692 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.61■□□□□ 0.25
CRLF3-203ENST00000578692 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.61■□□□□ 0.25
CRLF3-203ENST00000578692 WASH3PC4AMC7 463 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 FGFR1OPO95684 399 aaKnown RBP16.6■□□□□ 0.25
CRLF3-203ENST00000578692 AFPP02771 609 aaKnown RBP16.6■□□□□ 0.25
CRLF3-203ENST00000578692 ADRB1P08588 477 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 HARS2P49590 506 aaKnown RBP16.6■□□□□ 0.25
CRLF3-203ENST00000578692 RGS7P49802 495 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 MFAP3P55082 362 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 DAOAP59103 153 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 GCNT1Q02742 428 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 KIAA1211LQ6NV74 962 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 ARHGEF19Q8IW93 802 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 FAM217AQ8IXS0 508 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 TRIML1Q8N9V2 468 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 RBBP8NLQ8NC74 664 aaPredicted RBP16.6■□□□□ 0.25
CRLF3-203ENST00000578692 DDI1Q8WTU0 396 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 EDEM2Q9BV94 578 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 CD248Q9HCU0 757 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 CACNA2D2Q9NY47 1150 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 CALCOCO1Q9P1Z2 691 aa16.6■□□□□ 0.25
CRLF3-203ENST00000578692 HBS1LQ9Y450 684 aaKnown RBP16.6■□□□□ 0.25
CRLF3-203ENST00000578692 LNP1A1A4G5 178 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 PATE3B3GLJ2 98 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 M0QYV0 167 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 ZNF217O75362 1048 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 GABBR2O75899 941 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 CALCAP01258 141 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 BRD2P25440 801 aaKnown RBP16.59■□□□□ 0.25
CRLF3-203ENST00000578692 PTGER3P43115 390 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 GEN1Q17RS7 908 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 SLC36A4Q6YBV0 504 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 ARMCX6Q7L4S7 300 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 UCMAQ8WVF2 138 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 ERLEC1Q96DZ1 483 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 PIWIL1Q96J94 861 aaKnown RBP16.59■□□□□ 0.25
CRLF3-203ENST00000578692 HSFY1Q96LI6 401 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 LSM14BQ9BX40 385 aaKnown RBP16.59■□□□□ 0.25
CRLF3-203ENST00000578692 SLC2A11Q9BYW1 496 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 KIAA1468Q9P260 1216 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 RAD54BQ9Y620 910 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 STON1Q9Y6Q2 735 aa16.59■□□□□ 0.25
CRLF3-203ENST00000578692 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.25
CRLF3-203ENST00000578692 C4orf47A7E2U8 309 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 PIK3R2O00459 728 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 NPC1O15118 1278 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 AP5Z1O43299 807 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 NDUFV2P19404 249 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 KCNA4P22459 653 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 UBE2HP62256 183 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 IRX4P78413 519 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 CAMK4Q16566 473 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 MPPE1Q53F39 396 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 SYT12Q8IV01 421 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 IRGQQ8WZA9 623 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 KREMEN1Q96MU8 473 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 TMEM74BQ9NUR3 256 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 ELOVL2Q9NXB9 296 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 THAP10Q9P2Z0 257 aaPredicted RBP16.58■□□□□ 0.24
CRLF3-203ENST00000578692 CLEC4EQ9ULY5 219 aa16.58■□□□□ 0.24
CRLF3-203ENST00000578692 TSPAN3O60637 253 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 DPP6P42658 865 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 ZNF132P52740 706 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 RPL6Q02878 288 aaKnown RBP16.57■□□□□ 0.24
CRLF3-203ENST00000578692 E2F5Q15329 346 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 LYSMD4Q5XG99 296 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 ANKS1BQ7Z6G8 1248 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 CREBRFQ8IUR6 639 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 DEFB119Q8N690 84 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
CRLF3-203ENST00000578692 MRGPRX1Q96LB2 322 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 INTS2Q9H0H0 1204 aaKnown RBP16.57■□□□□ 0.24
CRLF3-203ENST00000578692 UBE2TQ9NPD8 197 aaPredicted RBP16.57■□□□□ 0.24
CRLF3-203ENST00000578692 EVLQ9UI08 416 aaPredicted RBP16.57■□□□□ 0.24
CRLF3-203ENST00000578692 RWDD2AQ9UIY3 292 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 STOML2Q9UJZ1 356 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 CNTN6Q9UQ52 1028 aa16.57■□□□□ 0.24
CRLF3-203ENST00000578692 CEP192Q8TEP8 1941 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 IGHV1OR15-9A0A0B4J2B8 117 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 MSI1O43347 362 aaKnown RBP16.56■□□□□ 0.24
CRLF3-203ENST00000578692 TIMM44O43615 452 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 FBXO21O94952 628 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 LATS1O95835 1130 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 LTFP02788 710 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 KRT5P13647 590 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 IL12RB1P42701 662 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 ZNF445P59923 1031 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 STARD3Q14849 445 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 TRIM61Q5EBN2 209 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 ADGRF1Q5T601 910 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 DAB2IPQ5VWQ8 1189 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 MSANTD2Q6P1R3 559 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 CLEC4CQ8WTT0 213 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 GOLGA1Q92805 767 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms