RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 TMEM9BQ9NQ34 198 aa4.26□□□□□ -1.73
PTPRM-206ENST00000578093 TMLHEQ9NVH6 421 aa4.26□□□□□ -1.73
PTPRM-206ENST00000578093 OBP2AQ9NY56 170 aa4.26□□□□□ -1.73
PTPRM-206ENST00000578093 TBX20Q9UMR3 447 aa4.26□□□□□ -1.73
PTPRM-206ENST00000578093 PCDHB14Q9Y5E9 798 aa4.26□□□□□ -1.73
PTPRM-206ENST00000578093 WNT6Q9Y6F9 365 aa4.26□□□□□ -1.73
PTPRM-206ENST00000578093 MUC22E2RYF6 1773 aaPredicted RBP4.26□□□□□ -1.73
PTPRM-206ENST00000578093 CFAP46Q8IYW2 2715 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ANO9A1A5B4 782 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 EPB41L2O43491 1005 aaKnown RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 TOM1L1O75674 476 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ATE1O95260 518 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 APBB3O95704 486 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 CAPNS1P04632 268 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 HAPLN1P10915 354 aaPredicted RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ODC1P11926 461 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 IMPDH2P12268 514 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 TYMPP19971 482 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 CYP3A5P20815 502 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 CSRP1P21291 193 aaKnown RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 MUTP22033 750 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 MARCKSP29966 332 aaPredicted RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 CDC25CP30307 473 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 OPRD1P41143 372 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 PTGER3P43115 390 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 TOB1P50616 345 aaPredicted RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 DGKEP52429 567 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 NCKAP1LP55160 1127 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 LILRA4P59901 499 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 IRX4P78413 519 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ZXDBP98169 803 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ARID5AQ03989 594 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 GRSF1Q12849 480 aaKnown RBP eCLIP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 MTF1Q14872 753 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 KARSQ15046 597 aaKnown RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 SAFBQ15424 915 aaKnown RBP eCLIP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ELF2Q15723 593 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 UAP1L1Q3KQV9 507 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ARHGAP15Q53QZ3 475 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 TMEM201Q5SNT2 666 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 SPATA1Q5VX52 437 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 C9orf57Q5W0N0 161 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 C19orf48Q6RUI8 117 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 LRSAM1Q6UWE0 723 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 GK5Q6ZS86 529 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 C1orf186Q6ZWK4 172 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 SYT13Q7L8C5 426 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 APBB1IPQ7Z5R6 666 aaPredicted RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 USP37Q86T82 979 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ITIH5Q86UX2 942 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 RASSF3Q86WH2 238 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 EFCAB13Q8IY85 973 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 CAMKK1Q8N5S9 505 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 IGSF22Q8N9C0 903 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 MFSD2AQ8NA29 543 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 OLIG1Q8TAK6 271 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ERMNQ8TAM6 284 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 CPLX3Q8WVH0 158 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 RLN3Q8WXF3 142 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 CD101Q93033 1021 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 BBC3Q96PG8 261 aaPredicted RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 GCNAQ96QF7 691 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 FNBP1Q96RU3 617 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 PLIN2Q99541 437 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 P2RY13Q9BPV8 354 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 C7orf69Q9H7B7 122 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ECT2Q9H8V3 914 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 TMEM74BQ9NUR3 256 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 LRWD1Q9UFC0 647 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 MBD1Q9UIS9 605 aaPredicted RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 STRIP2Q9ULQ0 834 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 MAFFQ9ULX9 164 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 UBQLN1Q9UMX0 589 aaKnown RBP4.25□□□□□ -1.73
PTPRM-206ENST00000578093 EFR3BQ9Y2G0 817 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ASB3Q9Y575 518 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 PCDHB6Q9Y5E3 794 aa4.25□□□□□ -1.73
PTPRM-206ENST00000578093 ACACAQ13085 2346 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 MYH10P35580 1976 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 FLNBO75369 2602 aaKnown RBP4.24□□□□□ -1.73
PTPRM-206ENST00000578093 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 C2orf78A6NCI8 922 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 TMEM8BA6NDV4 472 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 ANKRD63C9JTQ0 380 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 K7EQS6 105 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 PIRO00625 290 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 CLDN3O15551 220 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 ATG13O75143 517 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 NOL4O94818 638 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 RHOBTB1O94844 696 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 ADRB2P07550 413 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 CLTAP09496 248 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 CEACAM1P13688 526 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 PLS3P13797 630 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 ENGP17813 658 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 DRD1P21728 446 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 ACAT1P24752 427 aaKnown RBP4.24□□□□□ -1.73
PTPRM-206ENST00000578093 GUCY2CP25092 1073 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 AVPR1AP37288 418 aa4.24□□□□□ -1.73
PTPRM-206ENST00000578093 MATR3P43243 847 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTPRM-206ENST00000578093 DHPSP49366 369 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms