RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TMC5Q6UXY8 1006 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 SLC25A41Q8N5S1 370 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 TMEM176AQ96HP8 235 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 CHST12Q9NRB3 414 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 GGA3Q9NZ52 723 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 BIRC5O15392 142 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 PMPCBO75439 489 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 ADRA1DP25100 572 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 GSTT1P30711 240 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 EFCAB12Q6NXP0 572 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 FOXR1Q6PIV2 292 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 ZNF606Q8WXB4 792 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 TBC1D10AQ9BXI6 508 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 RGS18Q9NS28 235 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 IARS2Q9NSE4 1012 aaKnown RBP11.02□□□□□ -0.65
SEC22B-201ENST00000578049 ATP6V1B2P21281 511 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ACAT1P24752 427 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 PIK3CGP48736 1102 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ST13P50502 369 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 BST2Q10589 180 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 LACTB2Q53H82 288 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 DUPD1Q68J44 220 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 SLC47A2Q86VL8 602 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 RXFP2Q8WXD0 754 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 INPP4AQ96PE3 977 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ZNF70Q9UC06 446 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 IQGAP1P46940 1657 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ASTN2O75129 1339 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 TECPR2O15040 1411 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 KBTBD13C9JR72 458 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 NR5A2O00482 541 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 CBX6O95503 412 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 SUPT20HL2P0C7V6 817 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 PIK3R1P27986 724 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 HARS2P49590 506 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 TRIM71Q2Q1W2 868 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ZRANB3Q5FWF4 1079 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 PRR5LQ6MZQ0 368 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 DHDDSQ86SQ9 333 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 C2orf69Q8N8R5 385 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ASB7Q9H672 318 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 VTA1Q9NP79 307 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 KDELC2Q7Z4H8 507 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 C19orf18Q8NEA5 215 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ACTRT2Q8TDY3 377 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 PRPF19Q9UMS4 504 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 GUCA1CO95843 209 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ITGALP20701 1170 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 PTDSS1P48651 473 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ST8SIA6P61647 398 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 UBE3AQ05086 875 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 GLB1LQ6UWU2 654 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 SLC9A9Q8IVB4 645 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ART4Q93070 314 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 CINPQ9BW66 212 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 CHORDC1Q9UHD1 332 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ITGA11Q9UKX5 1188 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 A0A096LPK6 155 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 PDE2AO00408 941 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 SFSWAPQ12872 951 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 FASTKQ14296 549 aaKnown RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 DDR2Q16832 855 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 ZFYVE19Q96K21 471 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 CAMKK2Q96RR4 588 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 KRT84Q9NSB2 600 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 BLOC1S4Q9NUP1 217 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 TUBA8Q9NY65 449 aaPredicted RBP11.01□□□□□ -0.65
SEC22B-201ENST00000578049 GPRC5DQ9NZD1 345 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 CLUHO75153 1309 aa11.01□□□□□ -0.65
SEC22B-201ENST00000578049 AREL1O15033 823 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 SNAP91O60641 907 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 RECQL5O94762 991 aaPredicted RBP11□□□□□ -0.65
SEC22B-201ENST00000578049 ANKS6Q68DC2 871 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 MFSD5Q6N075 450 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 ST13P5Q8NFI4 369 aaPredicted RBP11□□□□□ -0.65
SEC22B-201ENST00000578049 SH2D3AQ9BRG2 576 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 NEURL4Q96JN8 1562 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 CEP152O94986 1710 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 TBC1D12O60347 775 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 ODC1P11926 461 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 MLNP12872 115 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 TWF1Q12792 350 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 ATG16L2Q8NAA4 619 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 COLGALT1Q8NBJ5 622 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 HTR3CQ8WXA8 447 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 STK39Q9UEW8 545 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 PRKAG2Q9UGJ0 569 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 TMCO1Q9UM00 188 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 TULP2O00295 520 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 GLP2RO95838 553 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 RPS12P25398 132 aaKnown RBP11□□□□□ -0.65
SEC22B-201ENST00000578049 SLC11A2P49281 568 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 ZDHHC13Q8IUH4 622 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 OTULINQ96BN8 352 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 TMEM109Q9BVC6 243 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 DSEQ9UL01 958 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 CYP2F1P24903 491 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms