RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 ZNF518BQ9C0D4 1074 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 ALDH8A1Q9H2A2 487 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 NT5MQ9NPB1 228 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 METTL5Q9NRN9 209 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 RGS18Q9NS28 235 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TRMT13Q9NUP7 481 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 HCN3Q9P1Z3 774 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 HPS5Q9UPZ3 1129 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 PTPRJQ12913 1337 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 ERICH4A6NGS2 130 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CCDC188H7C350 402 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CES2O00748 559 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TXNDC9O14530 226 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TLR5O60602 858 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 LTFP02788 710 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 POLBP06746 335 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 KLK3P07288 261 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 COL6A1P12109 1028 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF24P17028 368 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 PTPN1P18031 435 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 NCF2P19878 526 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 IDSP22304 550 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 HOXC12P31275 282 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 ALDH18A1P54886 795 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 RBM10P98175 930 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 POU4F1Q01851 419 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 USP10Q14694 798 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 BRD3Q15059 726 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CBWD3Q5JTY5 395 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CBWD5Q5RIA9 395 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 WSCD1Q658N2 575 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TPGS2Q68CL5 300 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 LAYNQ6UX15 382 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 AGMOQ6ZNB7 445 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 ARMCX6Q7L4S7 300 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 SETD3Q86TU7 594 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 UNC93AQ86WB7 457 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 ZDHHC17Q8IUH5 632 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 DENND1CQ8IV53 801 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 KIAA0319LQ8IZA0 1049 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CCDC185Q8N715 623 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 SCAIQ8N9R8 606 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TMC2Q8TDI7 906 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 WFIKKN2Q8TEU8 576 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 PPP1R13LQ8WUF5 828 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 POF1BQ8WVV4 589 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 MKL1Q969V6 931 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 SERAC1Q96JX3 654 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM237Q96Q45 408 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 ARHGAP39Q9C0H5 1083 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TBC1D13Q9NVG8 400 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 INTS13Q9NVM9 706 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 H2AFY2Q9P0M6 372 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 FBXL5Q9UKA1 691 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 GTF3C4Q9UKN8 822 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 PCDHGA4Q9Y5G9 962 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 IQGAP3Q86VI3 1631 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CLTCL1P53675 1640 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 A0A1W2PQ67 120 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PIPSLA2A3N6 862 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 LACTBL1A8MY62 500 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SMIM22K7EJ46 135 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MEIS2O14770 477 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RRP8O43159 456 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TREHO43280 583 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 OR6A2O95222 327 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FTCDO95954 541 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM107AO95990 144 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 APRTP07741 180 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ATP6V1C1P21283 382 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SDHBP21912 280 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PSMD8P48556 350 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MASP1P48740 699 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TRPC1P48995 793 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FNTAP49354 379 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 DGKGP49619 791 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TMPRSS15P98073 1019 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CAP1Q01518 475 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 DR1Q01658 176 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 GUCY2DQ02846 1103 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CYP24A1Q07973 514 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TROAPQ12815 778 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 GPS1Q13098 491 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNHIT3Q15649 155 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 GDF6Q6KF10 455 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF544Q6NX49 715 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF852Q6ZMS4 543 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TFAP2DQ7Z6R9 452 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CRLF3Q8IUI8 442 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TRIM59Q8IWR1 403 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CERS5Q8N5B7 392 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TTC29Q8NA56 475 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 OR10G6Q8NH81 332 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 HCAR2Q8TDS4 363 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 IGDCC4Q8TDY8 1250 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 COG1Q8WTW3 980 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CPA5Q8WXQ8 436 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TTC17Q96AE7 1141 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CABS1Q96KC9 395 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms