RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 RTP3Q9BQQ7 232 aa14.32□□□□□ -0.12
RNF43-202ENST00000577625 RXFP1Q9HBX9 757 aa14.32□□□□□ -0.12
RNF43-202ENST00000577625 ATXN10Q9UBB4 475 aa14.32□□□□□ -0.12
RNF43-202ENST00000577625 NKX1-2Q9UD57 310 aaPredicted RBP14.32□□□□□ -0.12
RNF43-202ENST00000577625 ASIC3Q9UHC3 531 aa14.32□□□□□ -0.12
RNF43-202ENST00000577625 PATJQ8NI35 1801 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 F8W810 466 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 M0QZQ0 153 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 NBNO60934 754 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 CYP11A1P05108 521 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 ITGB1P05556 798 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 ITIH2P19823 946 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 SF3A3Q12874 501 aaKnown RBP eCLIP14.31□□□□□ -0.129e-18■■□□□ 11.4
RNF43-202ENST00000577625 CDO1Q16878 200 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 GLB1LQ6UWU2 654 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 LCA5Q86VQ0 697 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 CCDC89Q8N998 374 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 SNF8Q96H20 258 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 FAM192AQ9GZU8 254 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 KRT82Q9NSB4 513 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 SCOCQ9UIL1 159 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 DNPEPQ9ULA0 475 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 CDH9Q9ULB4 789 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 DRG1Q9Y295 367 aaKnown RBP14.31□□□□□ -0.12
RNF43-202ENST00000577625 ATP8A1Q9Y2Q0 1164 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 VWA8A3KMH1 1905 aa14.31□□□□□ -0.12
RNF43-202ENST00000577625 MYBPHLA2RUH7 354 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 TP73O15350 636 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 ENDOD1O94919 500 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 DESP17661 470 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 SDC4P31431 198 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 ADIGQ0VDE8 80 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 PARP6Q2NL67 630 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 BBS12Q6ZW61 710 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 ZNF365Q70YC5 407 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 FAM35AQ86V20 835 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 KCTD6Q8NC69 237 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 SPATA18Q8TC71 538 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 DNAJC9Q8WXX5 260 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 NKD2Q969F2 451 aaPredicted RBP14.3□□□□□ -0.12
RNF43-202ENST00000577625 PCED1BQ96HM7 432 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 MED10Q9BTT4 135 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 FTHL17Q9BXU8 183 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 FRMD8P1Q9BZ68 369 aaPredicted RBP14.3□□□□□ -0.12
RNF43-202ENST00000577625 ZNF638Q14966 1978 aaKnown RBP14.3□□□□□ -0.12
RNF43-202ENST00000577625 PRPSAP2O60256 369 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 SHBGP04278 402 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 CD48P09326 243 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 NUDT17P0C025 328 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 FAM200BP0CF97 657 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 TPBGLP0DKB5 382 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 ATF2P15336 505 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 PTPN9P43378 593 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 DSC1Q08554 894 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 BFSP2Q13515 415 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 OASLQ15646 514 aaKnown RBP14.3□□□□□ -0.12
RNF43-202ENST00000577625 RHBDF2Q6PJF5 856 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 ENDOVQ8N8Q3 282 aaKnown RBP14.3□□□□□ -0.12
RNF43-202ENST00000577625 TTC13Q8NBP0 860 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 FAM172AQ8WUF8 416 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 RSPH1Q8WYR4 309 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 KCTD13Q8WZ19 329 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 HSPH1Q92598 858 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 FAM136AQ96C01 138 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 C11orf84Q9BUA3 381 aaPredicted RBP14.3□□□□□ -0.12
RNF43-202ENST00000577625 NGRNQ9NPE2 291 aaKnown RBP14.3□□□□□ -0.12
RNF43-202ENST00000577625 TMEM30AQ9NV96 361 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 OGDHLQ9ULD0 1010 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 ZMYND8Q9ULU4 1186 aaPredicted RBP14.3□□□□□ -0.12
RNF43-202ENST00000577625 TMCO1Q9UM00 188 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 MICAL3Q7RTP6 2002 aa14.3□□□□□ -0.12
RNF43-202ENST00000577625 CST8O60676 142 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 PEX11AO75192 247 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 DDHD2O94830 711 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 CCL5P13501 91 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 TFE3P19532 575 aaPredicted RBP14.29□□□□□ -0.12
RNF43-202ENST00000577625 PAX3P23760 479 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 KLRC2P26717 231 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 PCSK1P29120 753 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 SCNN1BP51168 640 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 PMS2P54278 862 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 VCPP55072 806 aaKnown RBP14.29□□□□□ -0.12
RNF43-202ENST00000577625 CAV1Q03135 178 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 ADCY1Q08828 1119 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 BOLA3Q53S33 107 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 NOMO2Q5JPE7 1267 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 DCLRE1AQ6PJP8 1040 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 CROCCP2Q86T23 111 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 ZNF280BQ86YH2 543 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 SLC35B2Q8TB61 432 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 SUSD3Q96L08 255 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 NDNQ99608 321 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 ADAM33Q9BZ11 813 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 VCX3BQ9H321 246 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 PABPC3Q9H361 631 aaKnown RBP14.29□□□□□ -0.12
RNF43-202ENST00000577625 VCX3AQ9NNX9 186 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 GGT7Q9UJ14 662 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 ARL2BPQ9Y2Y0 163 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 AGTP01019 485 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms