RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 TMPRSS12Q86WS5 348 aa14.03□□□□□ -0.16
COPS3-214ENST00000577246 OR2T3Q8NH03 318 aa14.03□□□□□ -0.16
COPS3-214ENST00000577246 C1orf216Q8TAB5 229 aa14.03□□□□□ -0.16
COPS3-214ENST00000577246 PARD3BQ8TEW8 1205 aa14.03□□□□□ -0.16
COPS3-214ENST00000577246 NXPE2Q96DL1 559 aa14.03□□□□□ -0.16
COPS3-214ENST00000577246 HNRNPABQ99729 332 aaKnown RBP14.03□□□□□ -0.16
COPS3-214ENST00000577246 GZF1Q9H116 711 aaPredicted RBP14.03□□□□□ -0.16
COPS3-214ENST00000577246 SDCBP2Q9H190 292 aa14.03□□□□□ -0.16
COPS3-214ENST00000577246 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.03□□□□□ -0.16
COPS3-214ENST00000577246 ANKRD6Q9Y2G4 727 aa14.03□□□□□ -0.16
COPS3-214ENST00000577246 MYOFQ9NZM1 2061 aa14.02□□□□□ -0.16
COPS3-214ENST00000577246 MDM4O15151 490 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 C4BPAP04003 597 aaKnown RBP14.02□□□□□ -0.17
COPS3-214ENST00000577246 CORO1AP31146 461 aaKnown RBP14.02□□□□□ -0.17
COPS3-214ENST00000577246 HNF1BP35680 557 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 CASP4P49662 377 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 ZBTB16Q05516 673 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 CAMK2BQ13554 666 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 KNOP1Q1ED39 458 aaKnown RBP14.02□□□□□ -0.17
COPS3-214ENST00000577246 KIF19Q2TAC6 998 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 CLEC20AQ6ZU45 233 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 GPRIN1Q7Z2K8 1008 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 ADAT2Q7Z6V5 191 aaKnown RBP14.02□□□□□ -0.17
COPS3-214ENST00000577246 FAM124AQ86V42 546 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 ARHGAP18Q8N392 663 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 C12orf29Q8N999 325 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 JAKMIP2Q96AA8 810 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 PIWIL1Q96J94 861 aaKnown RBP14.02□□□□□ -0.17
COPS3-214ENST00000577246 C7orf25Q9BPX7 421 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 IMPG2Q9BZV3 1241 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 LHX5Q9H2C1 402 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 ZSCAN16Q9H4T2 348 aaPredicted RBP14.02□□□□□ -0.17
COPS3-214ENST00000577246 NMUR1Q9HB89 426 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 FTSJ1Q9UET6 329 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 STRIP2Q9ULQ0 834 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.02□□□□□ -0.17
COPS3-214ENST00000577246 SNX11Q9Y5W9 270 aa14.02□□□□□ -0.17
COPS3-214ENST00000577246 LRRIQ3A6PVS8 624 aaPredicted RBP14.01□□□□□ -0.17
COPS3-214ENST00000577246 HHLA1C9JL84 531 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 PRKCHP24723 683 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 KIF11P52732 1056 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 BCAT1P54687 386 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 PDE4CQ08493 712 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 STK38Q15208 465 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 E2F4Q16254 413 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 PTPRNQ16849 979 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 TTC31Q49AM3 519 aaPredicted RBP14.01□□□□□ -0.17
COPS3-214ENST00000577246 CCDC157Q569K6 752 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 C6orf118Q5T5N4 469 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 LRRC69Q6ZNQ3 347 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 CACUL1Q86Y37 369 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 CPXM2Q8N436 756 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 ADAM32Q8TC27 787 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 DDI1Q8WTU0 396 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 SKA1Q96BD8 255 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 DHX58Q96C10 678 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 CYFIP2Q96F07 1278 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 DCBLD2Q96PD2 775 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 USP28Q96RU2 1077 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 NT5C1AQ9BXI3 368 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 BTBD1Q9H0C5 482 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 TM9SF3Q9HD45 589 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 HMGXB4Q9UGU5 601 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 RASAL2Q9UJF2 1139 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 NUDT5Q9UKK9 219 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 PLA2G4CQ9UP65 541 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 BTBD3Q9Y2F9 522 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 PCDHGA1Q9Y5H4 931 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 IGSF10Q6WRI0 2623 aa14.01□□□□□ -0.17
COPS3-214ENST00000577246 MYO18AQ92614 2054 aaKnown RBP14□□□□□ -0.17
COPS3-214ENST00000577246 FAM149AA5PLN7 773 aa14□□□□□ -0.17
COPS3-214ENST00000577246 RRP8O43159 456 aaKnown RBP14□□□□□ -0.17
COPS3-214ENST00000577246 PAPSS1O43252 624 aaPredicted RBP14□□□□□ -0.17
COPS3-214ENST00000577246 VNN1O95497 513 aa14□□□□□ -0.17
COPS3-214ENST00000577246 SEMA4FO95754 770 aa14□□□□□ -0.17
COPS3-214ENST00000577246 KLKB1P03952 638 aa14□□□□□ -0.17
COPS3-214ENST00000577246 CD27P26842 260 aa14□□□□□ -0.17
COPS3-214ENST00000577246 PIK3CAP42336 1068 aa14□□□□□ -0.17
COPS3-214ENST00000577246 ASPAP45381 313 aa14□□□□□ -0.17
COPS3-214ENST00000577246 NASPP49321 788 aaPredicted RBP14□□□□□ -0.17
COPS3-214ENST00000577246 C21orf59P57076 290 aa14□□□□□ -0.17
COPS3-214ENST00000577246 ZNF445P59923 1031 aa14□□□□□ -0.17
COPS3-214ENST00000577246 EHHADHQ08426 723 aa14□□□□□ -0.17
COPS3-214ENST00000577246 INCA1Q0VD86 236 aa14□□□□□ -0.17
COPS3-214ENST00000577246 CAMK2GQ13555 558 aaPredicted RBP14□□□□□ -0.17
COPS3-214ENST00000577246 ZACNQ401N2 412 aa14□□□□□ -0.17
COPS3-214ENST00000577246 FAM173BQ6P4H8 233 aa14□□□□□ -0.17
COPS3-214ENST00000577246 RSRC2Q7L4I2 434 aaKnown RBP14□□□□□ -0.17
COPS3-214ENST00000577246 LSM14AQ8ND56 463 aaKnown RBP14□□□□□ -0.17
COPS3-214ENST00000577246 WFIKKN2Q8TEU8 576 aa14□□□□□ -0.17
COPS3-214ENST00000577246 GOLGA1Q92805 767 aa14□□□□□ -0.17
COPS3-214ENST00000577246 C6orf106Q9H6K1 298 aaPredicted RBP14□□□□□ -0.17
COPS3-214ENST00000577246 CYP3A43Q9HB55 503 aa14□□□□□ -0.17
COPS3-214ENST00000577246 SGK2Q9HBY8 427 aa14□□□□□ -0.17
COPS3-214ENST00000577246 AGO1Q9UL18 857 aaKnown RBP14□□□□□ -0.17
COPS3-214ENST00000577246 PVALEFA0A1B0GWK0 134 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 IKBKBO14920 756 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 PPP6R2O75170 966 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 KIF20AO95235 890 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 ASS1P00966 412 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms